PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Itril07G0005300.2 ipomoea_triloba Itril07G0005300.2
Iind02G0024320.1 isatis_indigotica Iind02G0024320.1
Iind02G0024320.2 isatis_indigotica Iind02G0024320.2
Iind02G0034220.1 isatis_indigotica Iind02G0034220.1
ItaiItaiw_v1_scaffold_330238310.1 isoetes_taiwanensis ItaiItaiw_v1_scaffold_330238310.1
Jmim03G0014480.1 jacaranda_mimosifolia Jmim03G0014480.1
Jmim03G0014490.1 jacaranda_mimosifolia Jmim03G0014490.1
Jmim15G0009210.1 jacaranda_mimosifolia Jmim15G0009210.1
Jaut4635220053810 jamesoniella_autumnalis Jaut4635220053810
Jaut4819800079910 jamesoniella_autumnalis Jaut4819800079910
Jaut4896920109710 jamesoniella_autumnalis Jaut4896920109710
Jcat15G0001720 juglans_cathayensis Jcat15G0001720
juglans_cinerea_g16070.t1 juglans_cinerea juglans_cinerea_g16070.t1
juglans_cinerea_g26240.t1 juglans_cinerea juglans_cinerea_g26240.t1
juglans_cinerea_g7666.t1 juglans_cinerea juglans_cinerea_g7666.t1
Jhin01G0035600 juglans_hindsii Jhin01G0035600
Jhin15G0001800 juglans_hindsii Jhin15G0001800
Jhin16G0006050 juglans_hindsii Jhin16G0006050
juglans_mandshurica_rna-Jman007T0017600.1 juglans_mandshurica juglans_mandshurica_rna-Jman007T0017600.1
JmicC7860610003060.1 juglans_microcarpa JmicC7860610003060.1
JmicC8069630028680.1 juglans_microcarpa JmicC8069630028680.1
Jmicscaffold51500259210.1 juglans_microcarpa Jmicscaffold51500259210.1
juglans_microcarpa_x_regia_XP_040995879.1 juglans_microcarpa_x_regia juglans_microcarpa_x_regia_XP_040995879.1
juglans_microcarpa_x_regia_XP_040998802.1 juglans_microcarpa_x_regia juglans_microcarpa_x_regia_XP_040998802.1
juglans_microcarpa_x_regia_XP_041005608.1 juglans_microcarpa_x_regia juglans_microcarpa_x_regia_XP_041005608.1
juglans_microcarpa_x_regia_XP_041023016.1 juglans_microcarpa_x_regia juglans_microcarpa_x_regia_XP_041023016.1
juglans_microcarpa_x_regia_XP_041023023.1 juglans_microcarpa_x_regia juglans_microcarpa_x_regia_XP_041023023.1
juglans_microcarpa_x_regia_XP_041023032.1 juglans_microcarpa_x_regia juglans_microcarpa_x_regia_XP_041023032.1
juglans_microcarpa_x_regia_XP_041023037.1 juglans_microcarpa_x_regia juglans_microcarpa_x_regia_XP_041023037.1
juglans_microcarpa_x_regia_XP_041023043.1 juglans_microcarpa_x_regia juglans_microcarpa_x_regia_XP_041023043.1