PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Iind00G0034310.1 Alkaloid 16OMT medium borderline
Iind00G0035060.1 Alkaloid 16OMT medium borderline
Iind00G0036430.1 Alkaloid 16OMT medium borderline
Iind01G0026690.1 Alkaloid 16OMT medium borderline
Iind01G0026710.1 Alkaloid 16OMT medium borderline
Iind01G0026730.1 Alkaloid 16OMT medium borderline
Iind02G0018850.1 Alkaloid 16OMT medium borderline
Iind02G0018850.2 Alkaloid 16OMT medium borderline
Iind02G0018850.4 Alkaloid 16OMT medium borderline
Iind02G0018850.5 Alkaloid 16OMT medium borderline
Iind02G0018850.7 Alkaloid 16OMT medium borderline
Iind02G0029540.1 Alkaloid 16OMT medium borderline
Iind03G0004270.1 Alkaloid 16OMT medium borderline
Iind04G0024820.1 Alkaloid 16OMT medium borderline
Iind05G0028990.1 Alkaloid 16OMT medium borderline
Iind05G0029110.1 Alkaloid 16OMT medium borderline
Iind05G0033080.1 Alkaloid 16OMT medium borderline
Iind05G0036430.1 Alkaloid 16OMT medium borderline
Iind06G0003360.1 Alkaloid 16OMT medium borderline
Iind06G0003380.1 Alkaloid 16OMT medium borderline
Iind06G0003390.1 Alkaloid 16OMT medium borderline
Iind06G0003400.1 Alkaloid 16OMT medium borderline
Iind05G0015940.1 Alkaloid 6OMT_4OMT_SOMT medium pass
Iind05G0015970.1 Alkaloid 6OMT_4OMT_SOMT medium borderline
Iind00G0000850.1 Alkaloid 7DLGT low borderline
Iind00G0002120.1 Alkaloid 7DLGT low borderline
Iind00G0016930.1 Alkaloid 7DLGT low borderline
Iind00G0025180.1 Alkaloid 7DLGT low borderline
Iind01G0002380.1 Alkaloid 7DLGT low borderline
Iind01G0004660.1 Alkaloid 7DLGT low borderline
Iind01G0012710.1 Alkaloid 7DLGT low borderline
Iind01G0014750.1 Alkaloid 7DLGT low borderline
Iind01G0026890.1 Alkaloid 7DLGT low borderline
Iind01G0026900.1 Alkaloid 7DLGT low borderline
Iind01G0026910.1 Alkaloid 7DLGT low borderline
Iind01G0036980.1 Alkaloid 7DLGT low borderline
Iind01G0043310.1 Alkaloid 7DLGT medium pass
Iind02G0004360.1 Alkaloid 7DLGT medium pass
Iind02G0004510.1 Alkaloid 7DLGT medium pass
Iind02G0004780.1 Alkaloid 7DLGT low borderline
Iind02G0005890.1 Alkaloid 7DLGT low borderline
Iind02G0005900.1 Alkaloid 7DLGT low borderline
Iind02G0005920.1 Alkaloid 7DLGT low borderline
Iind02G0005930.1 Alkaloid 7DLGT medium pass
Iind02G0009090.1 Alkaloid 7DLGT low borderline
Iind02G0021480.1 Alkaloid 7DLGT medium pass
Iind02G0029380.1 Alkaloid 7DLGT medium pass
Iind02G0040180.1 Alkaloid 7DLGT low borderline
Iind02G0040190.1 Alkaloid 7DLGT low borderline
Iind03G0002540.1 Alkaloid 7DLGT high pass