PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
Iind00G0013300.2 Alkaloid IO low borderline
Iind00G0013300.4 Alkaloid IO low borderline
Iind00G0026760.1 Alkaloid IO medium borderline
Iind01G0003540.1 Alkaloid IO medium borderline
Iind01G0004190.1 Alkaloid IO medium pass
Iind01G0005690.1 Alkaloid IO medium borderline
Iind01G0008300.1 Alkaloid IO medium borderline
Iind01G0040340.1 Alkaloid IO low borderline
Iind02G0001020.1 Alkaloid IO medium borderline
Iind02G0014730.1 Alkaloid IO medium borderline
Iind03G0008370.1 Alkaloid IO medium borderline
Iind03G0019370.1 Alkaloid IO medium borderline
Iind03G0028840.1 Alkaloid IO medium borderline
Iind04G0000250.1 Alkaloid IO high pass
Iind04G0001590.1 Alkaloid IO low borderline
Iind04G0005950.1 Alkaloid IO medium borderline
Iind04G0013690.1 Alkaloid IO low borderline
Iind04G0024460.2 Alkaloid IO low borderline
Iind04G0024460.3 Alkaloid IO low borderline
Iind04G0024660.1 Alkaloid IO medium borderline
Iind04G0024660.2 Alkaloid IO medium borderline
Iind04G0031140.1 Alkaloid IO medium pass
Iind05G0010240.1 Alkaloid IO low borderline
Iind05G0011420.1 Alkaloid IO medium borderline
Iind05G0023450.1 Alkaloid IO medium borderline
Iind05G0023460.1 Alkaloid IO medium borderline
Iind05G0023470.1 Alkaloid IO medium borderline
Iind05G0031060.1 Alkaloid IO medium borderline
Iind05G0039430.1 Alkaloid IO medium pass
Iind06G0024620.1 Alkaloid IO medium borderline
Iind06G0024650.1 Alkaloid IO low borderline
Iind06G0027390.2 Alkaloid IO low borderline
Iind06G0027390.4 Alkaloid IO low borderline
Iind06G0027390.5 Alkaloid IO low borderline
Iind06G0029890.1 Alkaloid IO medium borderline
Iind06G0038630.1 Alkaloid IO medium borderline
IindContig008560012970.2 Alkaloid IO low borderline
IindContig010900021230.2 Alkaloid IO low borderline
IindContig011130022050.1 Alkaloid IO medium borderline