Isatis indigotica (isatis_indigotica)
Imported from atlas release summary for Isatis indigotica.
1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1891
Candidate Genes
BAHD
7.08%
4CL
5.93%
C4H
5.44%
C3'H/CYP98A
4.79%
POD
4.23%
CYP76
3.39%
NMT
3.33%
IFS
3.28%
Other Families
62.53%
More Families (96)
F3H
135
3.03%
T3O
128
2.88%
SGD
126
2.83%
UGT
112
2.52%
7DLGT
99
2.23%
DWF4/CYP90B1
88
1.98%
UFGT
84
1.89%
SMT1/SMT2/SMT3
82
1.84%
CODM/T6ODM
81
1.82%
CAD
75
1.69%
CYP71
73
1.64%
STR
71
1.6%
CAS
69
1.55%
F3'H/CYP75B
68
1.53%
BBE
57
1.28%
BR6OX2/CYP85A2
55
1.24%
H6H
53
1.19%
CSE
52
1.17%
TPS
52
1.17%
GES
49
1.1%
IFR
46
1.03%
COMT
43
0.97%
LAMT
41
0.92%
T16H
40
0.9%
IO
39
0.88%
CCR
37
0.83%
CYP90D1
36
0.81%
ANR
35
0.79%
RAS
33
0.74%
TAT
33
0.74%
GS
32
0.72%
LAC
32
0.72%
TRI/TRII
31
0.7%
FNS
31
0.7%
NCS
30
0.67%
COR
30
0.67%
8HGO
30
0.67%
G8O/G8H
28
0.63%
F3'5'H/CYP75A
26
0.58%
SQE
24
0.54%
BR6OX1/CYP85A1
23
0.52%
16OMT
22
0.49%
F5H/CYP84A
22
0.49%
CPD/CYP90A1
21
0.47%
ANS/LDOX
20
0.45%
ROT3/CYP90C1
20
0.45%
SLS
18
0.4%
GGPPS
17
0.38%
HCT
16
0.36%
CPR
16
0.36%
PAL
15
0.34%
CYP51G1
15
0.34%
AACT
14
0.31%
DFR
13
0.29%
SQS/FDFT1
13
0.29%
PYKS
11
0.25%
CYP719
11
0.25%
XMT_MXMT_DXMT
11
0.25%
FPPS
11
0.25%
PMT
10
0.22%
CCoAOMT
10
0.22%
CNMT
9
0.2%
CHI
9
0.2%
SMO1/SMO2
9
0.2%
CYP80B1
8
0.18%
MPO
8
0.18%
DXS
8
0.18%
CMK/IspE
8
0.18%
CHS
7
0.16%
MCT/IspD
7
0.16%
HDS/IspG
7
0.16%
7DLH
6
0.13%
HMGS
6
0.13%
TYDC_DDC
5
0.11%
FLS
5
0.11%
HPPR
5
0.11%
DWF7
5
0.11%
MVD
5
0.11%
HMGR
5
0.11%
ADC
4
0.09%
CPI1
4
0.09%
DWF5
4
0.09%
MVK
4
0.09%
HDR/IspH
4
0.09%
ISY
3
0.07%
TDC
3
0.07%
DWF1
3
0.07%
DET2
3
0.07%
IDI
3
0.07%
6OMT_4OMT_SOMT
2
0.04%
DXR
2
0.04%
PMK
2
0.04%
ODC
1
0.02%
HYD1
1
0.02%
FK
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 546 | 19 | BAHD (267) | View species results |
| Alkaloid pathway | 445 | 21 | SGD (119) | View species results |
| Phenylpropanoid pathway | 406 | 13 | POD (177) | View species results |
| Rosmarinic acid pathway | 170 | 7 | C4H (61) | View species results |
| Flavonoid pathway | 167 | 11 | UFGT (64) | View species results |
| Steroid pathway | 157 | 11 | SMT1/SMT2/SMT3 (56) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1477 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 364 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Iind00G0000850.1 | Terpenoid | UGT | medium | pass | UGT__00057__sp_O81498_U72E3_ARATH |
| Iind00G0002120.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Iind00G0016930.1 | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |
| Iind00G0025180.1 | Terpenoid | UGT | medium | pass | UGT__00070__sp_Q5XF20_U84A1_ARATH |
| Iind01G0002380.1 | Terpenoid | UGT | medium | pass | UGT__00102__sp_Q9LZD8_U89A2_ARATH |
| Iind01G0004660.1 | Terpenoid | UGT | medium | pass | UGT__00085__sp_Q9FIA0_U76C2_ARATH |
| Iind01G0004670.1 | Terpenoid | UGT | medium | pass | UGT__00084__sp_Q9FI99_U76C1_ARATH |
| Iind01G0010820.1 | Terpenoid | UGT | low | borderline | UGT__00111__sp_Q9ZQ99_U73C1_ARATH |
| Iind01G0012710.1 | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |
| Iind01G0014750.1 | Terpenoid | UGT | medium | pass | UGT__00086__sp_Q9LFJ8_U78D2_ARATH |
| Iind01G0026890.1 | Terpenoid | UGT | medium | pass | UGT__00035__sp_I1KEV6_FG3H_SOYBN |
| Iind01G0026900.1 | Terpenoid | UGT | medium | pass | UGT__00035__sp_I1KEV6_FG3H_SOYBN |
| Iind01G0026910.1 | Terpenoid | UGT | medium | pass | UGT__00035__sp_I1KEV6_FG3H_SOYBN |
| Iind01G0026920.1 | Terpenoid | UGT | medium | pass | UGT__00035__sp_I1KEV6_FG3H_SOYBN |
| Iind01G0036980.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Iind01G0043310.1 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Iind02G0000830.1 | Terpenoid | UGT | medium | pass | UGT__00092__sp_Q9LNI1_U72B3_ARATH |
| Iind02G0004360.1 | Terpenoid | UGT | medium | pass | UGT__00093__sp_Q9LR44_U75B1_ARATH |
| Iind02G0004510.1 | Terpenoid | UGT | medium | pass | UGT__00108__sp_Q9SYK9_U74E2_ARATH |
| Iind02G0004780.1 | Terpenoid | UGT | medium | pass | UGT__00091__sp_Q9LNE6_U89C1_ARATH |
| Iind02G0005890.1 | Terpenoid | UGT | medium | pass | UGT__00083__sp_Q9FE68_U71C5_ARATH |
| Iind02G0005900.1 | Terpenoid | UGT | medium | pass | UGT__00083__sp_Q9FE68_U71C5_ARATH |
| Iind02G0005920.1 | Terpenoid | UGT | medium | pass | UGT__00083__sp_Q9FE68_U71C5_ARATH |
| Iind02G0005930.1 | Terpenoid | UGT | medium | pass | UGT__00090__sp_Q9LML7_U71C3_ARATH |
| Iind02G0009090.1 | Terpenoid | UGT | medium | pass | UGT__00046__sp_K4GMD6_73C9_BARVU |
| Iind02G0014880.1 | Terpenoid | UGT | medium | pass | UGT__00076__sp_Q8L7M0_TUN_ARATH |
| Iind02G0021480.1 | Terpenoid | UGT | medium | pass | UGT__00055__sp_O48676_U74B1_ARATH |
| Iind02G0029380.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Iind02G0040180.1 | Terpenoid | UGT | medium | pass | UGT__00102__sp_Q9LZD8_U89A2_ARATH |
| Iind02G0040190.1 | Terpenoid | UGT | medium | pass | UGT__00102__sp_Q9LZD8_U89A2_ARATH |
| Iind03G0002540.1 | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| Iind03G0002560.1 | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| Iind03G0004920.1 | Terpenoid | UGT | medium | pass | UGT__00046__sp_K4GMD6_73C9_BARVU |
| Iind03G0004950.1 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Iind03G0006530.1 | Terpenoid | UGT | medium | pass | UGT__00112__sp_Q9ZQG4_U73B5_ARATH |
| Iind03G0016970.1 | Terpenoid | UGT | medium | pass | UGT__00081__sp_Q9C768_U76B1_ARATH |
| Iind03G0016980.1 | Terpenoid | UGT | low | borderline | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| Iind03G0017390.1 | Terpenoid | UGT | medium | pass | UGT__00095__sp_Q9LSY6_U71B6_ARATH |
| Iind03G0017410.1 | Terpenoid | UGT | medium | pass | UGT__00096__sp_Q9LSY8_U71B2_ARATH |
| Iind03G0017420.1 | Terpenoid | UGT | medium | pass | UGT__00097__sp_Q9LSY9_U71B1_ARATH |
| Iind03G0017440.1 | Terpenoid | UGT | medium | pass | UGT__00097__sp_Q9LSY9_U71B1_ARATH |
| Iind03G0017670.1 | Terpenoid | UGT | medium | pass | UGT__00100__sp_Q9LVF0_U84A2_ARATH |
| Iind03G0022940.1 | Terpenoid | UGT | low | borderline | UGT__00088__sp_Q9LK73_U88A1_ARATH |
| Iind03G0028040.1 | Terpenoid | UGT | medium | pass | UGT__00081__sp_Q9C768_U76B1_ARATH |
| Iind03G0036820.1 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Iind04G0003930.1 | Terpenoid | UGT | medium | pass | UGT__00049__sp_O22820_U74F1_ARATH |
| Iind04G0003940.1 | Terpenoid | UGT | medium | pass | UGT__00050__sp_O22822_U74F2_ARATH |
| Iind04G0011180.1 | Terpenoid | UGT | low | borderline | UGT__00070__sp_Q5XF20_U84A1_ARATH |
| Iind04G0011380.1 | Terpenoid | UGT | medium | pass | UGT__00044__sp_K4GIP0_73C12_BARVU |
| Iind04G0011390.1 | Terpenoid | UGT | medium | pass | UGT__00041__sp_K4GGT4_73C11_BARVU |