PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Iind00G0009730.1 Flavonoid C4H medium borderline
Iind03G0029210.1 Flavonoid C4H low borderline
Iind04G0006810.1 Flavonoid C4H medium borderline
Iind04G0017760.1 Flavonoid C4H medium borderline
Iind04G0017770.1 Flavonoid C4H medium pass
Iind04G0017790.1 Flavonoid C4H medium borderline
Iind04G0017800.1 Flavonoid C4H medium borderline
Iind05G0015450.1 Flavonoid C4H low borderline
Iind05G0015470.1 Flavonoid C4H low borderline
Iind05G0015490.1 Flavonoid C4H low borderline
IindContig009990018180.1 Flavonoid C4H medium borderline
IindContig009990018190.1 Flavonoid C4H medium pass
IindContig009990018210.1 Flavonoid C4H medium borderline
IindContig009990018220.1 Flavonoid C4H medium borderline
Iind00G0008690.1 Rosmarinic Acid C4H low borderline
Iind00G0008930.1 Rosmarinic Acid C4H low borderline
Iind00G0009070.1 Rosmarinic Acid C4H low borderline
Iind00G0009080.1 Rosmarinic Acid C4H low borderline
Iind00G0009120.1 Rosmarinic Acid C4H medium pass
Iind00G0009130.1 Rosmarinic Acid C4H medium pass
Iind00G0009730.1 Rosmarinic Acid C4H low borderline
Iind00G0014750.1 Rosmarinic Acid C4H low borderline
Iind00G0014750.2 Rosmarinic Acid C4H low borderline
Iind00G0015750.1 Rosmarinic Acid C4H low borderline
Iind00G0015760.1 Rosmarinic Acid C4H low borderline
Iind00G0015770.1 Rosmarinic Acid C4H low borderline
Iind00G0015770.2 Rosmarinic Acid C4H low borderline
Iind00G0015780.1 Rosmarinic Acid C4H low borderline
Iind00G0015780.2 Rosmarinic Acid C4H low borderline
Iind00G0015790.1 Rosmarinic Acid C4H low borderline
Iind00G0015800.1 Rosmarinic Acid C4H low borderline
Iind00G0015810.1 Rosmarinic Acid C4H medium pass
Iind00G0015820.1 Rosmarinic Acid C4H medium pass
Iind00G0015830.1 Rosmarinic Acid C4H low borderline
Iind00G0015840.1 Rosmarinic Acid C4H medium pass
Iind00G0015850.1 Rosmarinic Acid C4H medium pass
Iind00G0015860.1 Rosmarinic Acid C4H low borderline
Iind00G0015870.1 Rosmarinic Acid C4H medium pass
Iind00G0015880.1 Rosmarinic Acid C4H low borderline
Iind00G0015890.1 Rosmarinic Acid C4H medium pass
Iind00G0015890.2 Rosmarinic Acid C4H medium pass
Iind00G0015890.3 Rosmarinic Acid C4H medium pass
Iind00G0015890.4 Rosmarinic Acid C4H medium pass
Iind00G0021870.1 Rosmarinic Acid C4H low borderline
Iind00G0021870.3 Rosmarinic Acid C4H low borderline
Iind00G0021870.4 Rosmarinic Acid C4H low borderline
Iind00G0023650.1 Rosmarinic Acid C4H low borderline
Iind00G0023690.1 Rosmarinic Acid C4H medium pass
Iind00G0026760.1 Rosmarinic Acid C4H medium pass
Iind00G0028310.1 Rosmarinic Acid C4H low borderline