PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
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Gene Pathway Family Confidence Status
Iind00G0008020.1 Alkaloid GES medium pass
Iind00G0016200.1 Alkaloid GES medium pass
Iind00G0016230.1 Alkaloid GES medium pass
Iind00G0016230.2 Alkaloid GES medium pass
Iind00G0016240.1 Alkaloid GES medium pass
Iind00G0016260.1 Alkaloid GES medium pass
Iind00G0016270.1 Alkaloid GES medium pass
Iind00G0023680.1 Alkaloid GES low borderline
Iind00G0034110.1 Alkaloid GES medium pass
Iind00G0034140.1 Alkaloid GES medium pass
Iind00G0034740.1 Alkaloid GES medium pass
Iind01G0025320.1 Alkaloid GES medium pass
Iind01G0041220.1 Alkaloid GES low borderline
Iind02G0036590.1 Alkaloid GES medium pass
Iind04G0028940.1 Alkaloid GES medium pass
Iind04G0028940.2 Alkaloid GES medium pass
Iind04G0028940.3 Alkaloid GES medium pass
Iind04G0028940.4 Alkaloid GES medium pass
Iind04G0028940.5 Alkaloid GES medium pass
Iind04G0028940.6 Alkaloid GES medium pass
Iind04G0028970.1 Alkaloid GES medium pass
Iind04G0028970.2 Alkaloid GES medium pass
Iind04G0028970.3 Alkaloid GES medium pass
Iind04G0028970.4 Alkaloid GES medium pass
Iind05G0016020.1 Alkaloid GES low borderline
Iind05G0017280.1 Alkaloid GES medium pass
Iind05G0017280.2 Alkaloid GES medium pass
Iind05G0017280.3 Alkaloid GES medium pass
Iind05G0017280.4 Alkaloid GES medium pass
Iind05G0017290.1 Alkaloid GES medium pass
Iind05G0017290.2 Alkaloid GES medium pass
Iind05G0017290.3 Alkaloid GES medium pass
Iind05G0017290.4 Alkaloid GES medium pass
Iind05G0017290.5 Alkaloid GES medium pass
Iind05G0017290.6 Alkaloid GES medium pass
Iind05G0021140.1 Alkaloid GES medium pass
Iind05G0038790.1 Alkaloid GES low borderline
Iind05G0038790.2 Alkaloid GES low borderline
Iind06G0001580.1 Alkaloid GES medium pass
Iind06G0001580.2 Alkaloid GES medium pass
Iind06G0015330.1 Alkaloid GES medium pass
Iind06G0023190.1 Alkaloid GES medium pass
Iind06G0023220.1 Alkaloid GES medium pass
Iind06G0023390.1 Alkaloid GES low borderline
Iind06G0023420.1 Alkaloid GES medium pass
Iind06G0025730.1 Alkaloid GES medium pass
IindContig000930001710.1 Alkaloid GES medium pass
IindContig007250009640.1 Alkaloid GES medium pass
IindContig007250009650.1 Alkaloid GES medium pass