PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BBE
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Gene Pathway Family Confidence Status
Iind00G0024010.1 Alkaloid BBE medium borderline
Iind00G0024030.1 Alkaloid BBE medium borderline
Iind00G0024040.1 Alkaloid BBE medium borderline
Iind00G0024040.2 Alkaloid BBE medium borderline
Iind00G0024050.1 Alkaloid BBE medium borderline
Iind00G0024090.1 Alkaloid BBE medium borderline
Iind00G0024140.1 Alkaloid BBE medium borderline
Iind00G0024150.1 Alkaloid BBE medium borderline
Iind00G0024180.1 Alkaloid BBE medium borderline
Iind00G0024190.1 Alkaloid BBE medium borderline
Iind00G0024200.1 Alkaloid BBE medium borderline
Iind00G0024210.1 Alkaloid BBE medium borderline
Iind00G0024240.1 Alkaloid BBE medium borderline
Iind00G0024250.1 Alkaloid BBE medium borderline
Iind00G0024260.1 Alkaloid BBE medium borderline
Iind00G0024300.1 Alkaloid BBE medium borderline
Iind00G0024310.1 Alkaloid BBE medium borderline
Iind00G0024320.1 Alkaloid BBE medium borderline
Iind00G0024330.1 Alkaloid BBE medium borderline
Iind00G0024340.1 Alkaloid BBE medium borderline
Iind00G0024360.1 Alkaloid BBE medium borderline
Iind01G0005390.1 Alkaloid BBE low borderline
Iind01G0035000.1 Alkaloid BBE medium borderline
Iind01G0035020.1 Alkaloid BBE medium borderline
Iind01G0035030.1 Alkaloid BBE medium borderline
Iind02G0010440.1 Alkaloid BBE medium borderline
Iind02G0019450.1 Alkaloid BBE medium borderline
Iind02G0022450.1 Alkaloid BBE medium borderline
Iind02G0022460.1 Alkaloid BBE medium borderline
Iind02G0027010.1 Alkaloid BBE medium borderline
Iind02G0027020.1 Alkaloid BBE medium borderline
Iind02G0027030.1 Alkaloid BBE medium borderline
Iind02G0027040.1 Alkaloid BBE medium borderline
Iind02G0027070.1 Alkaloid BBE medium borderline
Iind02G0027080.1 Alkaloid BBE medium borderline
Iind02G0027090.1 Alkaloid BBE medium borderline
Iind02G0027150.1 Alkaloid BBE medium borderline
Iind02G0027210.1 Alkaloid BBE medium borderline
Iind02G0031030.1 Alkaloid BBE medium borderline
Iind02G0031920.1 Alkaloid BBE medium borderline
Iind04G0013380.1 Alkaloid BBE medium borderline
Iind04G0013400.1 Alkaloid BBE medium borderline
Iind05G0021480.1 Alkaloid BBE medium borderline
Iind05G0021490.1 Alkaloid BBE medium borderline
Iind05G0021500.1 Alkaloid BBE medium borderline
Iind05G0021510.1 Alkaloid BBE medium borderline
Iind05G0021520.1 Alkaloid BBE medium borderline
Iind05G0021530.1 Alkaloid BBE medium borderline
Iind05G0021540.1 Alkaloid BBE medium borderline
Iind05G0021550.1 Alkaloid BBE medium borderline