PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
Iind00G0009080.1 Steroid CYP90D1 low borderline
Iind00G0009730.1 Steroid CYP90D1 low borderline
Iind00G0014750.1 Steroid CYP90D1 low borderline
Iind00G0014750.2 Steroid CYP90D1 low borderline
Iind00G0015880.1 Steroid CYP90D1 low borderline
Iind00G0032180.1 Steroid CYP90D1 low borderline
Iind01G0004480.1 Steroid CYP90D1 medium borderline
Iind01G0005680.1 Steroid CYP90D1 low borderline
Iind01G0005690.1 Steroid CYP90D1 low borderline
Iind02G0017550.1 Steroid CYP90D1 medium borderline
Iind02G0017550.4 Steroid CYP90D1 medium borderline
Iind02G0017550.5 Steroid CYP90D1 medium borderline
Iind02G0017550.6 Steroid CYP90D1 medium borderline
Iind02G0017550.7 Steroid CYP90D1 medium borderline
Iind02G0017550.8 Steroid CYP90D1 medium borderline
Iind02G0026560.1 Steroid CYP90D1 low borderline
Iind02G0033070.1 Steroid CYP90D1 low borderline
Iind03G0008370.1 Steroid CYP90D1 low borderline
Iind03G0011070.1 Steroid CYP90D1 low borderline
Iind03G0019370.1 Steroid CYP90D1 low borderline
Iind03G0025790.1 Steroid CYP90D1 medium borderline
Iind03G0025790.2 Steroid CYP90D1 medium borderline
Iind04G0002040.2 Steroid CYP90D1 low borderline
Iind04G0002050.1 Steroid CYP90D1 low borderline
Iind05G0015170.1 Steroid CYP90D1 medium borderline
Iind05G0015170.2 Steroid CYP90D1 medium borderline
Iind05G0020330.1 Steroid CYP90D1 medium borderline
Iind05G0020330.3 Steroid CYP90D1 medium borderline
Iind05G0031060.1 Steroid CYP90D1 low borderline
Iind05G0033340.1 Steroid CYP90D1 low borderline
Iind05G0037500.1 Steroid CYP90D1 medium borderline
Iind06G0009390.1 Steroid CYP90D1 low borderline
Iind06G0027390.3 Steroid CYP90D1 medium borderline
Iind06G0030210.1 Steroid CYP90D1 low borderline
Iind06G0037680.1 Steroid CYP90D1 low borderline
IindContig009420016210.1 Steroid CYP90D1 low borderline