PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COMT
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Gene Pathway Family Confidence Status
Iind00G0034310.1 Phenylpropanoid COMT medium pass
Iind00G0035060.1 Phenylpropanoid COMT medium pass
Iind00G0036430.1 Phenylpropanoid COMT medium pass
Iind01G0026690.1 Phenylpropanoid COMT medium pass
Iind01G0026710.1 Phenylpropanoid COMT medium pass
Iind01G0026720.1 Phenylpropanoid COMT low borderline
Iind01G0026730.1 Phenylpropanoid COMT medium pass
Iind01G0033620.1 Phenylpropanoid COMT medium pass
Iind02G0007890.1 Phenylpropanoid COMT medium pass
Iind02G0018850.1 Phenylpropanoid COMT medium pass
Iind02G0018850.2 Phenylpropanoid COMT medium pass
Iind02G0018850.3 Phenylpropanoid COMT medium pass
Iind02G0018850.4 Phenylpropanoid COMT medium pass
Iind02G0018850.5 Phenylpropanoid COMT medium pass
Iind02G0018850.6 Phenylpropanoid COMT medium pass
Iind02G0018850.7 Phenylpropanoid COMT medium pass
Iind02G0025840.1 Phenylpropanoid COMT low borderline
Iind02G0027700.1 Phenylpropanoid COMT medium pass
Iind02G0029480.1 Phenylpropanoid COMT medium pass
Iind02G0029540.1 Phenylpropanoid COMT medium pass
Iind02G0029540.2 Phenylpropanoid COMT medium pass
Iind03G0004270.1 Phenylpropanoid COMT medium pass
Iind03G0019480.1 Phenylpropanoid COMT low borderline
Iind03G0019480.2 Phenylpropanoid COMT low borderline
Iind04G0024820.1 Phenylpropanoid COMT medium pass
Iind05G0015870.1 Phenylpropanoid COMT medium pass
Iind05G0015940.1 Phenylpropanoid COMT medium pass
Iind05G0015970.1 Phenylpropanoid COMT medium pass
Iind05G0028990.1 Phenylpropanoid COMT medium pass
Iind05G0029110.1 Phenylpropanoid COMT medium pass
Iind05G0033080.1 Phenylpropanoid COMT medium pass
Iind05G0036430.1 Phenylpropanoid COMT medium pass
Iind06G0003360.1 Phenylpropanoid COMT medium pass
Iind06G0003380.1 Phenylpropanoid COMT medium pass
Iind06G0003390.1 Phenylpropanoid COMT medium pass
Iind06G0003400.1 Phenylpropanoid COMT medium pass
Iind06G0004150.1 Phenylpropanoid COMT medium pass
Iind06G0029250.1 Phenylpropanoid COMT medium pass
Iind06G0030050.1 Phenylpropanoid COMT medium pass
Iind06G0039880.1 Phenylpropanoid COMT low borderline
Iind06G0039920.1 Phenylpropanoid COMT low borderline
IindContig000250000530.1 Phenylpropanoid COMT medium pass
IindContig006750008330.1 Phenylpropanoid COMT medium pass