PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAMT
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Gene Pathway Family Confidence Status
Iind00G0000580.1 Alkaloid LAMT medium borderline
Iind01G0003360.1 Alkaloid LAMT medium borderline
Iind01G0024310.1 Alkaloid LAMT medium borderline
Iind01G0025540.1 Alkaloid LAMT medium borderline
Iind01G0025540.2 Alkaloid LAMT medium pass
Iind01G0028510.1 Alkaloid LAMT medium borderline
Iind01G0028510.2 Alkaloid LAMT medium borderline
Iind01G0028510.3 Alkaloid LAMT medium borderline
Iind01G0028510.4 Alkaloid LAMT medium borderline
Iind02G0013640.1 Alkaloid LAMT medium borderline
Iind02G0020730.1 Alkaloid LAMT medium borderline
Iind02G0030180.1 Alkaloid LAMT medium borderline
Iind03G0027890.1 Alkaloid LAMT medium borderline
Iind05G0005110.1 Alkaloid LAMT medium borderline
Iind05G0005120.1 Alkaloid LAMT medium borderline
Iind05G0005130.1 Alkaloid LAMT medium borderline
Iind05G0005130.2 Alkaloid LAMT medium borderline
Iind05G0005130.3 Alkaloid LAMT medium borderline
Iind05G0005240.1 Alkaloid LAMT medium borderline
Iind05G0027720.1 Alkaloid LAMT medium borderline
Iind05G0027730.1 Alkaloid LAMT medium borderline
Iind05G0037640.1 Alkaloid LAMT medium borderline
Iind05G0037640.3 Alkaloid LAMT medium borderline
Iind06G0013700.1 Alkaloid LAMT medium borderline
Iind06G0015700.1 Alkaloid LAMT medium borderline
Iind06G0015700.2 Alkaloid LAMT medium borderline
Iind06G0015710.1 Alkaloid LAMT medium borderline
Iind06G0015720.1 Alkaloid LAMT medium borderline
Iind06G0015730.1 Alkaloid LAMT medium borderline
Iind06G0015740.1 Alkaloid LAMT medium borderline
Iind06G0021040.1 Alkaloid LAMT medium borderline
Iind06G0021060.1 Alkaloid LAMT medium borderline
Iind06G0027720.1 Alkaloid LAMT medium borderline
Iind06G0027730.1 Alkaloid LAMT medium borderline
IindContig001810003040.1 Alkaloid LAMT low borderline
IindContig001810003040.2 Alkaloid LAMT low borderline
IindContig008310012350.1 Alkaloid LAMT medium borderline
IindContig008310012360.1 Alkaloid LAMT medium borderline
IindContig008590013000.1 Alkaloid LAMT medium borderline
IindContig009550016670.1 Alkaloid LAMT low borderline
IindContig009550016670.2 Alkaloid LAMT low borderline