PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
Iind00G0000850.1 Flavonoid UFGT medium pass
Iind00G0002120.1 Flavonoid UFGT low borderline
Iind00G0008750.1 Flavonoid UFGT low borderline
Iind00G0016930.1 Flavonoid UFGT medium pass
Iind01G0002380.1 Flavonoid UFGT medium pass
Iind01G0010820.1 Flavonoid UFGT low borderline
Iind01G0012710.1 Flavonoid UFGT low borderline
Iind01G0014750.1 Flavonoid UFGT medium pass
Iind01G0026890.1 Flavonoid UFGT medium pass
Iind01G0026900.1 Flavonoid UFGT medium pass
Iind01G0026910.1 Flavonoid UFGT medium pass
Iind01G0026920.1 Flavonoid UFGT medium pass
Iind01G0036980.1 Flavonoid UFGT high pass
Iind02G0004360.1 Flavonoid UFGT high pass
Iind02G0004510.1 Flavonoid UFGT medium pass
Iind02G0005890.1 Flavonoid UFGT medium pass
Iind02G0005930.1 Flavonoid UFGT high pass
Iind02G0009090.1 Flavonoid UFGT medium pass
Iind02G0021480.1 Flavonoid UFGT medium pass
Iind02G0029380.1 Flavonoid UFGT low borderline
Iind02G0040190.1 Flavonoid UFGT medium pass
Iind03G0002540.1 Flavonoid UFGT medium pass
Iind03G0002560.1 Flavonoid UFGT medium pass
Iind03G0004920.1 Flavonoid UFGT medium pass
Iind03G0006530.1 Flavonoid UFGT medium pass
Iind03G0016970.1 Flavonoid UFGT high pass
Iind03G0017390.1 Flavonoid UFGT high pass
Iind03G0017440.1 Flavonoid UFGT high pass
Iind03G0017670.1 Flavonoid UFGT medium pass
Iind03G0022940.1 Flavonoid UFGT medium pass
Iind03G0028040.1 Flavonoid UFGT high pass
Iind03G0036820.1 Flavonoid UFGT medium pass
Iind04G0003930.1 Flavonoid UFGT medium pass
Iind04G0003940.1 Flavonoid UFGT medium pass
Iind04G0011410.1 Flavonoid UFGT low borderline
Iind04G0011420.1 Flavonoid UFGT low borderline
Iind04G0014190.1 Flavonoid UFGT low borderline
Iind04G0016450.1 Flavonoid UFGT medium pass
Iind04G0016450.2 Flavonoid UFGT high pass
Iind04G0018230.1 Flavonoid UFGT medium pass
Iind04G0018240.1 Flavonoid UFGT medium pass
Iind04G0018250.1 Flavonoid UFGT medium pass
Iind04G0018580.1 Flavonoid UFGT medium pass
Iind04G0018590.1 Flavonoid UFGT medium pass
Iind04G0020490.1 Flavonoid UFGT medium pass
Iind04G0027270.1 Flavonoid UFGT medium pass
Iind04G0029980.1 Flavonoid UFGT medium pass
Iind04G0029990.1 Flavonoid UFGT medium pass
Iind04G0030000.1 Flavonoid UFGT low borderline
Iind04G0030010.1 Flavonoid UFGT high pass