PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
Iind00G0015790.1 Alkaloid T16H medium borderline
Iind00G0021870.2 Alkaloid T16H low borderline
Iind00G0021870.5 Alkaloid T16H low borderline
Iind00G0023650.1 Alkaloid T16H medium borderline
Iind00G0030360.1 Alkaloid T16H low borderline
Iind00G0030410.1 Alkaloid T16H low borderline
Iind00G0036960.1 Alkaloid T16H low borderline
Iind01G0005680.1 Alkaloid T16H medium borderline
Iind02G0000930.1 Alkaloid T16H medium borderline
Iind02G0010330.1 Alkaloid T16H medium borderline
Iind02G0010330.3 Alkaloid T16H medium borderline
Iind02G0011600.1 Alkaloid T16H medium borderline
Iind02G0011610.1 Alkaloid T16H medium borderline
Iind02G0011620.1 Alkaloid T16H medium borderline
Iind03G0011080.1 Alkaloid T16H medium borderline
Iind03G0019380.1 Alkaloid T16H medium borderline
Iind03G0019400.1 Alkaloid T16H medium borderline
Iind04G0002040.2 Alkaloid T16H medium borderline
Iind04G0002090.1 Alkaloid T16H medium borderline
Iind04G0013700.1 Alkaloid T16H medium borderline
Iind04G0017540.1 Alkaloid T16H medium borderline
Iind04G0017760.1 Alkaloid T16H medium borderline
Iind04G0017790.1 Alkaloid T16H medium borderline
Iind04G0017800.1 Alkaloid T16H medium borderline
Iind04G0019160.1 Alkaloid T16H medium borderline
Iind04G0019160.2 Alkaloid T16H medium borderline
Iind04G0019160.3 Alkaloid T16H medium borderline
Iind04G0024460.5 Alkaloid T16H low borderline
Iind04G0025530.1 Alkaloid T16H medium borderline
Iind04G0029100.1 Alkaloid T16H medium borderline
Iind05G0037420.1 Alkaloid T16H medium borderline
Iind06G0012500.1 Alkaloid T16H medium borderline
Iind06G0012500.2 Alkaloid T16H medium borderline
Iind06G0024640.1 Alkaloid T16H medium borderline
Iind06G0027390.1 Alkaloid T16H medium borderline
Iind06G0027390.3 Alkaloid T16H medium borderline
IindContig009710017190.1 Alkaloid T16H low borderline
IindContig009990018180.1 Alkaloid T16H medium borderline
IindContig009990018210.1 Alkaloid T16H medium borderline
IindContig009990018220.1 Alkaloid T16H medium borderline