PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Iind03G0002560.1 Alkaloid 7DLGT medium pass
Iind03G0004920.1 Alkaloid 7DLGT low borderline
Iind03G0004950.1 Alkaloid 7DLGT low borderline
Iind03G0006530.1 Alkaloid 7DLGT low borderline
Iind03G0016970.1 Alkaloid 7DLGT medium pass
Iind03G0017390.1 Alkaloid 7DLGT low borderline
Iind03G0017410.1 Alkaloid 7DLGT low borderline
Iind03G0017420.1 Alkaloid 7DLGT low borderline
Iind03G0017440.1 Alkaloid 7DLGT low borderline
Iind03G0017670.1 Alkaloid 7DLGT low borderline
Iind03G0022940.1 Alkaloid 7DLGT low borderline
Iind03G0028040.1 Alkaloid 7DLGT high pass
Iind03G0036820.1 Alkaloid 7DLGT medium pass
Iind04G0003930.1 Alkaloid 7DLGT low borderline
Iind04G0003940.1 Alkaloid 7DLGT low borderline
Iind04G0011180.1 Alkaloid 7DLGT low borderline
Iind04G0011380.1 Alkaloid 7DLGT low borderline
Iind04G0011400.1 Alkaloid 7DLGT medium pass
Iind04G0011410.1 Alkaloid 7DLGT low borderline
Iind04G0011420.1 Alkaloid 7DLGT medium pass
Iind04G0014190.1 Alkaloid 7DLGT low borderline
Iind04G0016450.1 Alkaloid 7DLGT medium pass
Iind04G0016450.2 Alkaloid 7DLGT medium pass
Iind04G0016470.1 Alkaloid 7DLGT low borderline
Iind04G0018230.1 Alkaloid 7DLGT low borderline
Iind04G0018240.1 Alkaloid 7DLGT low borderline
Iind04G0018250.1 Alkaloid 7DLGT low borderline
Iind04G0018580.1 Alkaloid 7DLGT low borderline
Iind04G0018590.1 Alkaloid 7DLGT low borderline
Iind04G0020490.1 Alkaloid 7DLGT low borderline
Iind04G0027270.1 Alkaloid 7DLGT medium pass
Iind04G0029980.1 Alkaloid 7DLGT medium pass
Iind04G0029990.1 Alkaloid 7DLGT medium pass
Iind04G0030000.1 Alkaloid 7DLGT low borderline
Iind04G0030010.1 Alkaloid 7DLGT high pass
Iind04G0030020.1 Alkaloid 7DLGT low borderline
Iind04G0030760.1 Alkaloid 7DLGT low borderline
Iind04G0030770.1 Alkaloid 7DLGT low borderline
Iind04G0030800.1 Alkaloid 7DLGT low borderline
Iind05G0013110.1 Alkaloid 7DLGT low borderline
Iind05G0013260.1 Alkaloid 7DLGT low borderline
Iind05G0015400.1 Alkaloid 7DLGT low borderline
Iind05G0015410.1 Alkaloid 7DLGT low borderline
Iind05G0015670.1 Alkaloid 7DLGT low borderline
Iind05G0015700.1 Alkaloid 7DLGT low borderline
Iind05G0015710.1 Alkaloid 7DLGT low borderline
Iind05G0015770.1 Alkaloid 7DLGT medium pass
Iind05G0015780.1 Alkaloid 7DLGT medium pass
Iind05G0035420.1 Alkaloid 7DLGT low borderline
Iind05G0035430.1 Alkaloid 7DLGT low borderline