PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Leucobryum7664240088900 leucobryum Leucobryum7664240088900
Leucobryum7923800229000 leucobryum Leucobryum7923800229000
Leucobryum7951190281580 leucobryum Leucobryum7951190281580
Leucobryum7951190281590 leucobryum Leucobryum7951190281590
Leucobryum7953150286230 leucobryum Leucobryum7953150286230
Leucobryum7953150286270 leucobryum Leucobryum7953150286270
Leucobryum7953800287680 leucobryum Leucobryum7953800287680
Lalbi5486560015860 leucobryum_albidum Lalbi5486560015860
Lalbi5497660017210 leucobryum_albidum Lalbi5497660017210
Lalbi6577250038850 leucobryum_albidum Lalbi6577250038850
Lalbi7432160065830 leucobryum_albidum Lalbi7432160065830
Lalbi7664240088900 leucobryum_albidum Lalbi7664240088900
Lalbi7923800229000 leucobryum_albidum Lalbi7923800229000
Lalbi7951190281580 leucobryum_albidum Lalbi7951190281580
Lalbi7951190281590 leucobryum_albidum Lalbi7951190281590
Lalbi7953150286230 leucobryum_albidum Lalbi7953150286230
Lalbi7953150286270 leucobryum_albidum Lalbi7953150286270
Lalbi7953800287680 leucobryum_albidum Lalbi7953800287680
Lbowcontig_160132700 leucobryum_bowringii Lbowcontig_160132700
Lbowcontig_160132750 leucobryum_bowringii Lbowcontig_160132750
Lbowcontig_160140980 leucobryum_bowringii Lbowcontig_160140980
Lbowcontig_200176590 leucobryum_bowringii Lbowcontig_200176590
Lbowcontig_200205250 leucobryum_bowringii Lbowcontig_200205250
Lusiscaffold1030005910.1 linum_usitatissimum Lusiscaffold1030005910.1
Lusiscaffold3460228780.1 linum_usitatissimum Lusiscaffold3460228780.1
LchiScaffold2620152250 liriodendron_chinense LchiScaffold2620152250
LchiScaffold2620152290 liriodendron_chinense LchiScaffold2620152290
LchiScaffold30810181960 liriodendron_chinense LchiScaffold30810181960
litchi_chinensis_LITCHI011436.m1 litchi_chinensis litchi_chinensis_LITCHI011436.m1
lithospermum_erythrorhizon_LE12718.1 lithospermum_erythrorhizon lithospermum_erythrorhizon_LE12718.1