PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
LchiScaffold1210032230 Alkaloid 16OMT medium borderline
LchiScaffold12420036350 Alkaloid 16OMT medium borderline
LchiScaffold12420036360 Alkaloid 16OMT medium borderline
LchiScaffold12920040170 Alkaloid 16OMT medium borderline
LchiScaffold13330047610 Alkaloid 16OMT medium borderline
LchiScaffold14530062010 Alkaloid 16OMT low borderline
LchiScaffold15990079240 Alkaloid 16OMT medium borderline
LchiScaffold15990079250 Alkaloid 16OMT medium borderline
LchiScaffold17140088040 Alkaloid 16OMT medium borderline
LchiScaffold18900106070 Alkaloid 16OMT medium borderline
LchiScaffold23140133830 Alkaloid 16OMT medium borderline
LchiScaffold26070151970 Alkaloid 16OMT medium borderline
LchiScaffold26070151980 Alkaloid 16OMT medium borderline
LchiScaffold30120179620 Alkaloid 16OMT medium borderline
LchiScaffold33330193740 Alkaloid 16OMT medium borderline
LchiScaffold3440199750 Alkaloid 16OMT medium borderline
LchiScaffold390219120 Alkaloid 16OMT medium borderline
LchiScaffold390219130 Alkaloid 16OMT medium borderline
LchiScaffold390219140 Alkaloid 16OMT medium borderline
LchiScaffold390219150 Alkaloid 16OMT medium borderline
LchiScaffold390219160 Alkaloid 16OMT medium borderline
LchiScaffold390219190 Alkaloid 16OMT medium borderline
LchiScaffold390219200 Alkaloid 16OMT medium borderline
LchiScaffold390219210 Alkaloid 16OMT medium borderline
LchiScaffold390219220 Alkaloid 16OMT medium borderline
LchiScaffold390219230 Alkaloid 16OMT medium borderline
LchiScaffold390219240 Alkaloid 16OMT medium borderline
LchiScaffold390219250 Alkaloid 16OMT medium borderline
LchiScaffold390219340 Alkaloid 16OMT medium borderline
LchiScaffold390219350 Alkaloid 16OMT medium borderline
LchiScaffold390219360 Alkaloid 16OMT medium borderline
LchiScaffold390219380 Alkaloid 16OMT medium borderline
LchiScaffold4260229940 Alkaloid 16OMT medium borderline
LchiScaffold4260229950 Alkaloid 16OMT medium borderline
LchiScaffold4260229970 Alkaloid 16OMT medium borderline
LchiScaffold4260229980 Alkaloid 16OMT medium borderline
LchiScaffold470242150 Alkaloid 16OMT medium borderline
LchiScaffold470242190 Alkaloid 16OMT medium borderline
LchiScaffold50247210 Alkaloid 16OMT medium borderline
LchiScaffold50247240 Alkaloid 16OMT medium borderline
LchiScaffold50247290 Alkaloid 16OMT medium borderline
LchiScaffold50247300 Alkaloid 16OMT medium borderline
LchiScaffold5270260300 Alkaloid 16OMT medium borderline
LchiScaffold5270260310 Alkaloid 16OMT medium borderline
LchiScaffold5270260320 Alkaloid 16OMT medium borderline
LchiScaffold7160292540 Alkaloid 16OMT medium borderline
LchiScaffold7160292570 Alkaloid 16OMT medium borderline
LchiScaffold7210293930 Alkaloid 16OMT medium borderline
LchiScaffold7210293960 Alkaloid 16OMT medium borderline
LchiScaffold7210293980 Alkaloid 16OMT medium borderline