PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COR
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Gene Pathway Family Confidence Status
LchiScaffold10240005750 Alkaloid COR medium pass
LchiScaffold11630024750 Alkaloid COR low borderline
LchiScaffold14410060880 Alkaloid COR low borderline
LchiScaffold14690064470 Alkaloid COR medium pass
LchiScaffold15220072600 Alkaloid COR medium pass
LchiScaffold15220072610 Alkaloid COR medium pass
LchiScaffold17530093090 Alkaloid COR low borderline
LchiScaffold17580093400 Alkaloid COR medium pass
LchiScaffold17580093410 Alkaloid COR medium pass
LchiScaffold17580093420 Alkaloid COR medium pass
LchiScaffold17580093430 Alkaloid COR low borderline
LchiScaffold17580093440 Alkaloid COR medium pass
LchiScaffold21030121120 Alkaloid COR medium pass
LchiScaffold21030121130 Alkaloid COR medium pass
LchiScaffold21030121140 Alkaloid COR medium pass
LchiScaffold21030121150 Alkaloid COR medium pass
LchiScaffold21030121160 Alkaloid COR medium pass
LchiScaffold21030121170 Alkaloid COR medium pass
LchiScaffold21420125090 Alkaloid COR medium pass
LchiScaffold320186100 Alkaloid COR medium pass
LchiScaffold32220188610 Alkaloid COR medium pass
LchiScaffold36370212920 Alkaloid COR medium pass
LchiScaffold36370212940 Alkaloid COR medium pass
LchiScaffold4160227840 Alkaloid COR medium pass
LchiScaffold4160227870 Alkaloid COR medium pass
LchiScaffold4160227880 Alkaloid COR medium pass
LchiScaffold4160227890 Alkaloid COR medium pass
LchiScaffold4650240450 Alkaloid COR medium pass
LchiScaffold470241380 Alkaloid COR medium pass
LchiScaffold4960245080 Alkaloid COR medium pass
LchiScaffold4960245100 Alkaloid COR medium pass
LchiScaffold7300299850 Alkaloid COR medium pass