PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
LchiScaffold11520022450 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
LchiScaffold13150045690 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
LchiScaffold14900067800 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
LchiScaffold14900067810 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
LchiScaffold14900067820 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
LchiScaffold17420092200 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
LchiScaffold17910097030 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
LchiScaffold19400111670 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
LchiScaffold19400111680 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
LchiScaffold2480143890 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
LchiScaffold30020178390 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
LchiScaffold320186650 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
LchiScaffold320186660 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
LchiScaffold320187070 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
LchiScaffold320187080 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
LchiScaffold34010196180 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
LchiScaffold4650239790 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
LchiScaffold4650239800 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
LchiScaffold4650239840 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
LchiScaffold4650239850 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
LchiScaffold4650239860 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
LchiScaffold4650239910 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
LchiScaffold4650239920 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
LchiScaffold4650239930 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
LchiScaffold5060252940 Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
LchiScaffold5060252950 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
LchiScaffold5060253440 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
LchiScaffold5060253450 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
LchiScaffold5300263610 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
LchiScaffold5620267040 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
LchiScaffold5750270070 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
LchiScaffold5750270140 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
LchiScaffold5940274880 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
LchiScaffold7230296240 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
LchiScaffold7890311790 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
LchiScaffold7890312170 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
LchiScaffold860326620 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
LchiScaffold860326640 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH