PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
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Gene Pathway Family Confidence Status
LchiScaffold1000001810 Phenylpropanoid POD medium pass
LchiScaffold1000002580 Phenylpropanoid POD medium pass
LchiScaffold10240004360 Phenylpropanoid POD medium pass
LchiScaffold1050009090 Phenylpropanoid POD medium pass
LchiScaffold10610010150 Phenylpropanoid POD medium pass
LchiScaffold11520022610 Phenylpropanoid POD medium pass
LchiScaffold11520022620 Phenylpropanoid POD medium pass
LchiScaffold11520022630 Phenylpropanoid POD low borderline
LchiScaffold11630024590 Phenylpropanoid POD medium pass
LchiScaffold11910027320 Phenylpropanoid POD medium pass
LchiScaffold11910028750 Phenylpropanoid POD medium pass
LchiScaffold11910029190 Phenylpropanoid POD medium pass
LchiScaffold11910029320 Phenylpropanoid POD low borderline
LchiScaffold12210033870 Phenylpropanoid POD medium pass
LchiScaffold12420035970 Phenylpropanoid POD medium pass
LchiScaffold12420035990 Phenylpropanoid POD medium pass
LchiScaffold12420036260 Phenylpropanoid POD medium pass
LchiScaffold12420036270 Phenylpropanoid POD medium pass
LchiScaffold12550036640 Phenylpropanoid POD low borderline
LchiScaffold13340047900 Phenylpropanoid POD medium pass
LchiScaffold13580050430 Phenylpropanoid POD medium pass
LchiScaffold14970068780 Phenylpropanoid POD medium pass
LchiScaffold15380072790 Phenylpropanoid POD medium pass
LchiScaffold15800076800 Phenylpropanoid POD medium pass
LchiScaffold1580076050 Phenylpropanoid POD low borderline
LchiScaffold16070080120 Phenylpropanoid POD low borderline
LchiScaffold16070080130 Phenylpropanoid POD medium pass
LchiScaffold16070080150 Phenylpropanoid POD medium pass
LchiScaffold1620081130 Phenylpropanoid POD low borderline
LchiScaffold1660083840 Phenylpropanoid POD medium pass
LchiScaffold17070086370 Phenylpropanoid POD low borderline
LchiScaffold17070086380 Phenylpropanoid POD medium pass
LchiScaffold17070086390 Phenylpropanoid POD medium pass
LchiScaffold17070086400 Phenylpropanoid POD medium pass
LchiScaffold17070086410 Phenylpropanoid POD medium pass
LchiScaffold1720090020 Phenylpropanoid POD medium pass
LchiScaffold1720090030 Phenylpropanoid POD medium pass
LchiScaffold1720090050 Phenylpropanoid POD medium pass
LchiScaffold1720090070 Phenylpropanoid POD medium pass
LchiScaffold1720090080 Phenylpropanoid POD medium pass
LchiScaffold1720090090 Phenylpropanoid POD medium pass
LchiScaffold1720090100 Phenylpropanoid POD medium pass
LchiScaffold1720090110 Phenylpropanoid POD medium pass
LchiScaffold1720090120 Phenylpropanoid POD medium pass
LchiScaffold1720090140 Phenylpropanoid POD medium pass
LchiScaffold1770095020 Phenylpropanoid POD medium pass
LchiScaffold18300101020 Phenylpropanoid POD medium pass
LchiScaffold18390101420 Phenylpropanoid POD medium pass
LchiScaffold18390101460 Phenylpropanoid POD medium pass
LchiScaffold1870103450 Phenylpropanoid POD medium pass