PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
LchiScaffold10880013450 Flavonoid IFR low borderline
LchiScaffold11090016030 Flavonoid IFR low borderline
LchiScaffold11230017870 Flavonoid IFR medium pass
LchiScaffold11230017890 Flavonoid IFR high pass
LchiScaffold12860039150 Flavonoid IFR low borderline
LchiScaffold130042170 Flavonoid IFR medium pass
LchiScaffold13150045080 Flavonoid IFR high pass
LchiScaffold13150045100 Flavonoid IFR high pass
LchiScaffold15390072840 Flavonoid IFR low borderline
LchiScaffold17220090760 Flavonoid IFR medium pass
LchiScaffold20910120490 Flavonoid IFR medium pass
LchiScaffold21190122910 Flavonoid IFR low borderline
LchiScaffold22400129720 Flavonoid IFR medium pass
LchiScaffold25640148480 Flavonoid IFR high pass
LchiScaffold280159450 Flavonoid IFR medium pass
LchiScaffold33120192250 Flavonoid IFR low borderline
LchiScaffold34760204640 Flavonoid IFR low borderline
LchiScaffold35230206300 Flavonoid IFR low borderline
LchiScaffold4170227990 Flavonoid IFR low borderline
LchiScaffold4320232720 Flavonoid IFR high pass
LchiScaffold4320233160 Flavonoid IFR low borderline
LchiScaffold4650239690 Flavonoid IFR low borderline
LchiScaffold5230258110 Flavonoid IFR low borderline
LchiScaffold5270261750 Flavonoid IFR low borderline
LchiScaffold5400265470 Flavonoid IFR high pass
LchiScaffold5620267070 Flavonoid IFR high pass
LchiScaffold5620267080 Flavonoid IFR high pass
LchiScaffold5620267090 Flavonoid IFR medium pass
LchiScaffold5620267100 Flavonoid IFR high pass
LchiScaffold5750269960 Flavonoid IFR high pass
LchiScaffold5940275070 Flavonoid IFR low borderline
LchiScaffold7420300490 Flavonoid IFR low borderline
LchiScaffold7420300520 Flavonoid IFR low borderline
LchiScaffold7760308970 Flavonoid IFR low borderline
LchiScaffold8840330570 Flavonoid IFR high pass
LchiScaffold8840330580 Flavonoid IFR high pass
LchiScaffold8840330590 Flavonoid IFR high pass
LchiScaffold9150335790 Flavonoid IFR low borderline
LchiScaffold9150339300 Flavonoid IFR low borderline
LchiScaffold9330342120 Flavonoid IFR low borderline
LchiScaffold9640348260 Flavonoid IFR high pass
LchiScaffold9640348290 Flavonoid IFR high pass
LchiScaffold980349150 Flavonoid IFR low borderline
LchiScaffold9890352530 Flavonoid IFR low borderline