PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CHS
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Gene Pathway Family Confidence Status Best Target
LchiScaffold1000000080 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
LchiScaffold1000000100 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
LchiScaffold1000000110 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
LchiScaffold1000000120 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
LchiScaffold1000000140 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
LchiScaffold1000000180 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
LchiScaffold1000000190 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
LchiScaffold1000000200 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
LchiScaffold1000000210 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
LchiScaffold1000000220 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
LchiScaffold15560074320 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
LchiScaffold15560074330 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
LchiScaffold15560074340 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
LchiScaffold20160116560 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
LchiScaffold20160116570 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
LchiScaffold20160116580 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
LchiScaffold20160116600 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
LchiScaffold34720202590 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
LchiScaffold4320235510 Flavonoid CHS medium pass CHS__00010__sp_Q9FEY5_CHSH1_HUMLU
LchiScaffold6930288860 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
LchiScaffold6930288870 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
LchiScaffold7760308750 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
LchiScaffold8200320960 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
LchiScaffold8200320970 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
LchiScaffold9430343430 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN