PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
LchiScaffold14000057180 Rosmarinic Acid RAS low borderline
LchiScaffold14000057600 Rosmarinic Acid RAS medium pass
LchiScaffold17630094610 Rosmarinic Acid RAS low borderline
LchiScaffold1820100010 Rosmarinic Acid RAS medium pass
LchiScaffold2580150150 Rosmarinic Acid RAS medium pass
LchiScaffold27480157340 Rosmarinic Acid RAS low borderline
LchiScaffold32020187880 Rosmarinic Acid RAS medium pass
LchiScaffold33410194300 Rosmarinic Acid RAS low borderline
LchiScaffold34190196980 Rosmarinic Acid RAS low borderline
LchiScaffold35780208720 Rosmarinic Acid RAS low borderline
LchiScaffold3690215890 Rosmarinic Acid RAS low borderline
LchiScaffold390219010 Rosmarinic Acid RAS low borderline
LchiScaffold4720242780 Rosmarinic Acid RAS low borderline
LchiScaffold50245990 Rosmarinic Acid RAS low borderline
LchiScaffold5370264450 Rosmarinic Acid RAS low borderline
LchiScaffold540264920 Rosmarinic Acid RAS medium pass
LchiScaffold540264930 Rosmarinic Acid RAS medium pass
LchiScaffold5620267580 Rosmarinic Acid RAS medium pass
LchiScaffold610278420 Rosmarinic Acid RAS medium pass
LchiScaffold6910288780 Rosmarinic Acid RAS low borderline
LchiScaffold8390323070 Rosmarinic Acid RAS medium pass
LchiScaffold8390323080 Rosmarinic Acid RAS medium pass
LchiScaffold8820329840 Rosmarinic Acid RAS medium pass
LchiScaffold9110334340 Rosmarinic Acid RAS medium pass
LchiScaffold9840350370 Rosmarinic Acid RAS medium pass
LchiScaffold9840350380 Rosmarinic Acid RAS medium pass
LchiScaffold9840350440 Rosmarinic Acid RAS medium pass
LchiScaffold9840350450 Rosmarinic Acid RAS medium pass
LchiScaffold9840350460 Rosmarinic Acid RAS medium pass