PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
LchiScaffold10240004380 Flavonoid F3H medium borderline
LchiScaffold10240004390 Flavonoid F3H medium borderline
LchiScaffold10240004400 Flavonoid F3H medium borderline
LchiScaffold10240005220 Flavonoid F3H low borderline
LchiScaffold10240005230 Flavonoid F3H low borderline
LchiScaffold10880012800 Flavonoid F3H medium borderline
LchiScaffold10880012810 Flavonoid F3H medium borderline
LchiScaffold10880012820 Flavonoid F3H medium borderline
LchiScaffold11300018070 Flavonoid F3H medium borderline
LchiScaffold11910029440 Flavonoid F3H medium borderline
LchiScaffold11910029690 Flavonoid F3H medium borderline
LchiScaffold11910031130 Flavonoid F3H medium borderline
LchiScaffold11910031140 Flavonoid F3H medium borderline
LchiScaffold12210033490 Flavonoid F3H medium borderline
LchiScaffold12210033550 Flavonoid F3H medium borderline
LchiScaffold12210033570 Flavonoid F3H medium borderline
LchiScaffold1350048260 Flavonoid F3H medium borderline
LchiScaffold13770053540 Flavonoid F3H medium borderline
LchiScaffold13920055140 Flavonoid F3H low borderline
LchiScaffold14810066580 Flavonoid F3H low borderline
LchiScaffold1580076750 Flavonoid F3H medium borderline
LchiScaffold1620081310 Flavonoid F3H low borderline
LchiScaffold1710087300 Flavonoid F3H medium borderline
LchiScaffold1710087310 Flavonoid F3H medium borderline
LchiScaffold17250090940 Flavonoid F3H medium borderline
LchiScaffold1820099640 Flavonoid F3H medium borderline
LchiScaffold1820099730 Flavonoid F3H medium borderline
LchiScaffold1820099760 Flavonoid F3H medium borderline
LchiScaffold1820099770 Flavonoid F3H medium borderline
LchiScaffold1820099800 Flavonoid F3H medium borderline
LchiScaffold1820099810 Flavonoid F3H medium borderline
LchiScaffold1820099820 Flavonoid F3H medium borderline
LchiScaffold1820099910 Flavonoid F3H medium borderline
LchiScaffold19000106780 Flavonoid F3H low borderline
LchiScaffold20840119740 Flavonoid F3H medium borderline
LchiScaffold21050121340 Flavonoid F3H medium borderline
LchiScaffold21510125920 Flavonoid F3H medium borderline
LchiScaffold21510125940 Flavonoid F3H medium borderline
LchiScaffold22320128630 Flavonoid F3H medium borderline
LchiScaffold23140133400 Flavonoid F3H medium borderline
LchiScaffold23140133410 Flavonoid F3H medium borderline
LchiScaffold2340136550 Flavonoid F3H low borderline
LchiScaffold23780137920 Flavonoid F3H medium borderline
LchiScaffold24000138790 Flavonoid F3H low borderline
LchiScaffold2620152120 Flavonoid F3H medium borderline
LchiScaffold27300156890 Flavonoid F3H medium borderline
LchiScaffold3040180800 Flavonoid F3H low borderline
LchiScaffold3040181020 Flavonoid F3H medium borderline
LchiScaffold31560184100 Flavonoid F3H medium borderline
LchiScaffold33410194630 Flavonoid F3H medium borderline