PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
LchiScaffold1040007510 Alkaloid T16H medium borderline
LchiScaffold1040007530 Alkaloid T16H medium borderline
LchiScaffold10880013080 Alkaloid T16H medium borderline
LchiScaffold10980014360 Alkaloid T16H medium borderline
LchiScaffold11910031350 Alkaloid T16H low borderline
LchiScaffold12910039670 Alkaloid T16H medium borderline
LchiScaffold12910039690 Alkaloid T16H medium borderline
LchiScaffold1350049550 Alkaloid T16H medium borderline
LchiScaffold1350049580 Alkaloid T16H medium borderline
LchiScaffold1350049600 Alkaloid T16H medium borderline
LchiScaffold1350049630 Alkaloid T16H medium borderline
LchiScaffold1470064490 Alkaloid T16H medium borderline
LchiScaffold1470064820 Alkaloid T16H medium borderline
LchiScaffold1480066430 Alkaloid T16H medium borderline
LchiScaffold16960085230 Alkaloid T16H medium borderline
LchiScaffold1720089110 Alkaloid T16H medium borderline
LchiScaffold17660094810 Alkaloid T16H medium borderline
LchiScaffold1850102280 Alkaloid T16H medium borderline
LchiScaffold1930110020 Alkaloid T16H medium borderline
LchiScaffold19790113620 Alkaloid T16H medium borderline
LchiScaffold19990114980 Alkaloid T16H medium borderline
LchiScaffold23140133740 Alkaloid T16H medium borderline
LchiScaffold24670142910 Alkaloid T16H medium borderline
LchiScaffold2480145340 Alkaloid T16H medium borderline
LchiScaffold25080147270 Alkaloid T16H medium borderline
LchiScaffold2720156580 Alkaloid T16H medium borderline
LchiScaffold2720156610 Alkaloid T16H medium borderline
LchiScaffold280160230 Alkaloid T16H medium borderline
LchiScaffold280160250 Alkaloid T16H medium borderline
LchiScaffold280160260 Alkaloid T16H medium borderline
LchiScaffold280160270 Alkaloid T16H medium borderline
LchiScaffold280160280 Alkaloid T16H medium pass
LchiScaffold29210174440 Alkaloid T16H medium borderline
LchiScaffold32710191090 Alkaloid T16H medium borderline
LchiScaffold3320192890 Alkaloid T16H medium borderline
LchiScaffold33360193790 Alkaloid T16H medium borderline
LchiScaffold33830195690 Alkaloid T16H medium borderline
LchiScaffold3440199780 Alkaloid T16H medium borderline
LchiScaffold3440199790 Alkaloid T16H medium borderline
LchiScaffold3440199870 Alkaloid T16H medium borderline
LchiScaffold34760204250 Alkaloid T16H medium borderline
LchiScaffold3560207910 Alkaloid T16H medium borderline
LchiScaffold4400236380 Alkaloid T16H medium borderline
LchiScaffold5270260940 Alkaloid T16H medium borderline
LchiScaffold5300261940 Alkaloid T16H medium borderline
LchiScaffold5300262540 Alkaloid T16H low borderline
LchiScaffold5300262590 Alkaloid T16H medium borderline
LchiScaffold5300262600 Alkaloid T16H medium borderline
LchiScaffold5300262610 Alkaloid T16H medium borderline
LchiScaffold5300263280 Alkaloid T16H medium borderline