PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status Best Target
LchiScaffold1040007440 Alkaloid G8O/G8H medium borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
LchiScaffold10430008150 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
LchiScaffold10880012950 Alkaloid G8O/G8H low borderline G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN
LchiScaffold11270017980 Alkaloid G8O/G8H medium pass G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
LchiScaffold11810026710 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
LchiScaffold11810026740 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
LchiScaffold11810026750 Alkaloid G8O/G8H medium pass G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
LchiScaffold12380034630 Alkaloid G8O/G8H medium borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
LchiScaffold13800054600 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
LchiScaffold1460063860 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
LchiScaffold1480066490 Alkaloid G8O/G8H medium pass G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
LchiScaffold1650082350 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
LchiScaffold1650082390 Alkaloid G8O/G8H low borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
LchiScaffold1650082400 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
LchiScaffold1650082470 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
LchiScaffold1650082580 Alkaloid G8O/G8H medium borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
LchiScaffold1720089350 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
LchiScaffold1720089390 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
LchiScaffold1720089400 Alkaloid G8O/G8H medium borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
LchiScaffold1720089430 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
LchiScaffold17660094660 Alkaloid G8O/G8H medium borderline G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN
LchiScaffold20340117490 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
LchiScaffold21180122830 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
LchiScaffold21180122840 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
LchiScaffold2790158370 Alkaloid G8O/G8H medium borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
LchiScaffold280159740 Alkaloid G8O/G8H medium borderline G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN
LchiScaffold30120179630 Alkaloid G8O/G8H medium borderline G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN
LchiScaffold3220188490 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
LchiScaffold33830195710 Alkaloid G8O/G8H medium borderline G8O_G8H__00001__sp_A0A2H4DGV8_C7BL6_INUHU
LchiScaffold33860195720 Alkaloid G8O/G8H medium borderline G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN
LchiScaffold3450200300 Alkaloid G8O/G8H low borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
LchiScaffold36820213880 Alkaloid G8O/G8H medium borderline G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN
LchiScaffold3850218710 Alkaloid G8O/G8H medium borderline G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN
LchiScaffold4260230170 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
LchiScaffold4260230230 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
LchiScaffold4260230290 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO
LchiScaffold5270260960 Alkaloid G8O/G8H medium borderline G8O_G8H__00003__sp_F8S1H3_C7BL1_HELAN
LchiScaffold6110279160 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
LchiScaffold7770309050 Alkaloid G8O/G8H medium borderline G8O_G8H__00002__sp_D1MI46_C76BA_SWEMU
LchiScaffold7770309080 Alkaloid G8O/G8H medium borderline G8O_G8H__00004__sp_Q8VWZ7_C76B6_CATRO