PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
LchiScaffold10090003280 Alkaloid GS low borderline
LchiScaffold10240005310 Alkaloid GS low borderline
LchiScaffold10240005330 Alkaloid GS low borderline
LchiScaffold10240005350 Alkaloid GS low borderline
LchiScaffold10240005360 Alkaloid GS low borderline
LchiScaffold10240005370 Alkaloid GS low borderline
LchiScaffold11520023110 Alkaloid GS high pass
LchiScaffold11520023120 Alkaloid GS high pass
LchiScaffold11520023130 Alkaloid GS high pass
LchiScaffold11520023150 Alkaloid GS medium pass
LchiScaffold11520023160 Alkaloid GS high pass
LchiScaffold11520023170 Alkaloid GS high pass
LchiScaffold11520023180 Alkaloid GS high pass
LchiScaffold12540036610 Alkaloid GS low borderline
LchiScaffold14140058420 Alkaloid GS medium pass
LchiScaffold15670075160 Alkaloid GS high pass
LchiScaffold15670075180 Alkaloid GS high pass
LchiScaffold16060079500 Alkaloid GS high pass
LchiScaffold16060079530 Alkaloid GS medium pass
LchiScaffold1720088610 Alkaloid GS low borderline
LchiScaffold18450101970 Alkaloid GS high pass
LchiScaffold18450101980 Alkaloid GS medium pass
LchiScaffold18700103860 Alkaloid GS low borderline
LchiScaffold18810104100 Alkaloid GS low borderline
LchiScaffold1920108050 Alkaloid GS low borderline
LchiScaffold2180126720 Alkaloid GS low borderline
LchiScaffold26550153080 Alkaloid GS low borderline
LchiScaffold2700154790 Alkaloid GS low borderline
LchiScaffold27540157680 Alkaloid GS low borderline
LchiScaffold370216140 Alkaloid GS high pass
LchiScaffold370216160 Alkaloid GS low borderline
LchiScaffold37040217570 Alkaloid GS low borderline
LchiScaffold390219100 Alkaloid GS low borderline
LchiScaffold4360236160 Alkaloid GS low borderline
LchiScaffold5300262530 Alkaloid GS low borderline
LchiScaffold5300262930 Alkaloid GS medium pass
LchiScaffold5300262940 Alkaloid GS medium pass
LchiScaffold6040276710 Alkaloid GS medium pass
LchiScaffold960347000 Alkaloid GS medium pass
LchiScaffold960347010 Alkaloid GS high pass
LchiScaffold960347060 Alkaloid GS high pass
LchiScaffold960347090 Alkaloid GS medium pass
LchiScaffold960347100 Alkaloid GS medium pass
LchiScaffold9860351770 Alkaloid GS low borderline
LchiScaffold9860351780 Alkaloid GS low borderline