PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
LchiScaffold11300019130 Alkaloid IO medium borderline
LchiScaffold13640051630 Alkaloid IO medium borderline
LchiScaffold15700075600 Alkaloid IO medium borderline
LchiScaffold1650082360 Alkaloid IO medium borderline
LchiScaffold16570083370 Alkaloid IO medium borderline
LchiScaffold17870096350 Alkaloid IO medium borderline
LchiScaffold1870103530 Alkaloid IO medium borderline
LchiScaffold1930110440 Alkaloid IO medium borderline
LchiScaffold20430117590 Alkaloid IO medium borderline
LchiScaffold23140133840 Alkaloid IO medium borderline
LchiScaffold2340135100 Alkaloid IO medium borderline
LchiScaffold2480145030 Alkaloid IO medium borderline
LchiScaffold25280147630 Alkaloid IO medium borderline
LchiScaffold28380166230 Alkaloid IO medium borderline
LchiScaffold34260198650 Alkaloid IO low borderline
LchiScaffold3850218700 Alkaloid IO medium borderline
LchiScaffold5010248960 Alkaloid IO low borderline
LchiScaffold50245550 Alkaloid IO medium borderline
LchiScaffold5070254620 Alkaloid IO medium borderline
LchiScaffold5270260920 Alkaloid IO medium borderline
LchiScaffold5270260950 Alkaloid IO medium borderline
LchiScaffold5300262620 Alkaloid IO medium borderline
LchiScaffold5300262630 Alkaloid IO medium borderline
LchiScaffold5500266210 Alkaloid IO low borderline
LchiScaffold7740305900 Alkaloid IO medium borderline
LchiScaffold7820310800 Alkaloid IO medium borderline
LchiScaffold8180319960 Alkaloid IO medium borderline
LchiScaffold860326390 Alkaloid IO medium borderline
LchiScaffold9410343170 Alkaloid IO medium borderline