TDC

Atlas summary family TDC.

Lineage Coverage

Detected in 29 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Miscanthus lutarioriparius

Chrysanthemum seticuspe

Zoysia matrella

Aegilops tauschii

Related Modules

Alkaloid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
Oruf02G0020590.1	oryza_rufipogon	Oruf02G0020590.1
Oruf04G0001840.1	oryza_rufipogon	Oruf04G0001840.1
Oruf10G0000270.1	oryza_rufipogon	Oruf10G0000270.1
Oruf11G0013960.1	oryza_rufipogon	Oruf11G0013960.1
Osat02G0022880.1	oryza_sativa	Osat02G0022880.1
Osat08G0002970.1	oryza_sativa	Osat08G0002970.1
Osat10G0000360.1	oryza_sativa	Osat10G0000360.1
OsatMH6302G0033150.1	oryza_sativa_spmh63	OsatMH6302G0033150.1
OsatMH6302G0033150.2	oryza_sativa_spmh63	OsatMH6302G0033150.2
OsatMH6302G0033150.3	oryza_sativa_spmh63	OsatMH6302G0033150.3
OsatMH6302G0043610.1	oryza_sativa_spmh63	OsatMH6302G0043610.1
OsatMH6302G0043610.7	oryza_sativa_spmh63	OsatMH6302G0043610.7
OsatMH6304G0003640.1	oryza_sativa_spmh63	OsatMH6304G0003640.1
OsatMH6304G0003640.2	oryza_sativa_spmh63	OsatMH6304G0003640.2
OsatMH6305G0005480.1	oryza_sativa_spmh63	OsatMH6305G0005480.1
OsatMH6307G0024530.3	oryza_sativa_spmh63	OsatMH6307G0024530.3
OsatMH6308G0003330.1	oryza_sativa_spmh63	OsatMH6308G0003330.1
OsatMH6310G0000930.1	oryza_sativa_spmh63	OsatMH6310G0000930.1
OsatMH6311G0025230.1	oryza_sativa_spmh63	OsatMH6311G0025230.1
OsatZS9702G0035370.1	oryza_sativa_spzs97	OsatZS9702G0035370.1
OsatZS9702G0046400.1	oryza_sativa_spzs97	OsatZS9702G0046400.1
OsatZS9702G0046400.7	oryza_sativa_spzs97	OsatZS9702G0046400.7
OsatZS9704G0003170.1	oryza_sativa_spzs97	OsatZS9704G0003170.1
OsatZS9706G0034600.1	oryza_sativa_spzs97	OsatZS9706G0034600.1
OsatZS9707G0024910.3	oryza_sativa_spzs97	OsatZS9707G0024910.3
OsatZS9708G0003800.1	oryza_sativa_spzs97	OsatZS9708G0003800.1
OsatZS9710G0000820.1	oryza_sativa_spzs97	OsatZS9710G0000820.1
OsatZS9711G0026680.1	oryza_sativa_spzs97	OsatZS9711G0026680.1
XP_003075194.2	ostreococcus_tauri	XP_003075194.2
ostrya_chinensis_OmuG0013673.1	ostrya_chinensis	ostrya_chinensis_OmuG0013673.1