TDC

Atlas summary family TDC.

Lineage Coverage

Detected in 29 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Miscanthus lutarioriparius

Chrysanthemum seticuspe

Zoysia matrella

Aegilops tauschii

Related Modules

Alkaloid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
ORGLA10G0002600.1	oryza_glaberrima	ORGLA10G0002600.1
Oglu02G0019680.1	oryza_glumaepatula	Oglu02G0019680.1
Oglu08G0002540.1	oryza_glumaepatula	Oglu08G0002540.1
Oglu10G0000300.1	oryza_glumaepatula	Oglu10G0000300.1
oryza_glumipatula_OGLUM02G19930.1	oryza_glumipatula	oryza_glumipatula_OGLUM02G19930.1
oryza_glumipatula_OGLUM08G02550.1	oryza_glumipatula	oryza_glumipatula_OGLUM08G02550.1
oryza_glumipatula_OGLUM10G00300.1	oryza_glumipatula	oryza_glumipatula_OGLUM10G00300.1
KAF0934070.1	oryza_granulata	KAF0934070.1
KN539066.1_FGP010	oryza_longistaminata	KN539066.1_FGP010
KN539403.1_FGP006	oryza_longistaminata	KN539403.1_FGP006
KN539459.1_FGP006	oryza_longistaminata	KN539459.1_FGP006
KN539537.1_FGP006	oryza_longistaminata	KN539537.1_FGP006
OMERI01G41060.1	oryza_meridionalis	OMERI01G41060.1
OMERI02G19560.1	oryza_meridionalis	OMERI02G19560.1
OMERI08G02450.1	oryza_meridionalis	OMERI08G02450.1
OMERI10G00170.1	oryza_meridionalis	OMERI10G00170.1
ONIVA05G19450.1	oryza_nivara	ONIVA05G19450.1
ONIVA07G07140.1	oryza_nivara	ONIVA07G07140.1
ONIVA09G11770.1	oryza_nivara	ONIVA09G11770.1
ONIVA10G00630.1	oryza_nivara	ONIVA10G00630.1
OoffiChr02g01734.1	oryza_officinalis	OoffiChr02g01734.1
OoffiChr07g01206.1	oryza_officinalis	OoffiChr07g01206.1
OoffiChr08g00256.1	oryza_officinalis	OoffiChr08g00256.1
OoffiChr10g00022.1	oryza_officinalis	OoffiChr10g00022.1
OoffiChr10g00022.2	oryza_officinalis	OoffiChr10g00022.2
OPUNC02G17530.1	oryza_punctata	OPUNC02G17530.1
OPUNC10G00300.1	oryza_punctata	OPUNC10G00300.1
Orhiscaffold1750064060.1	oryza_rhizomatis	Orhiscaffold1750064060.1
Orhiscaffold22250096770.1	oryza_rhizomatis	Orhiscaffold22250096770.1
Orhiscaffold35690167830.1	oryza_rhizomatis	Orhiscaffold35690167830.1