PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Pg_S5139.7 panax_ginseng Pg_S5139.7
Pg_S5237.1 panax_ginseng Pg_S5237.1
Pg_S5740.5 panax_ginseng Pg_S5740.5
Pg_S6162.8 panax_ginseng Pg_S6162.8
panax_japonicus_GWHPBEIH009117.1 panax_japonicus panax_japonicus_GWHPBEIH009117.1
panax_japonicus_GWHPBEIH011569.1 panax_japonicus panax_japonicus_GWHPBEIH011569.1
panax_japonicus_GWHPBEIH014870.1 panax_japonicus panax_japonicus_GWHPBEIH014870.1
panax_japonicus_GWHPBEIH017359.1 panax_japonicus panax_japonicus_GWHPBEIH017359.1
panax_japonicus_GWHPBEIH018992.1 panax_japonicus panax_japonicus_GWHPBEIH018992.1
panax_japonicus_GWHPBEIH020184.1 panax_japonicus panax_japonicus_GWHPBEIH020184.1
panax_japonicus_GWHPBEIH021035.1 panax_japonicus panax_japonicus_GWHPBEIH021035.1
panax_japonicus_GWHPBEIH039775.1 panax_japonicus panax_japonicus_GWHPBEIH039775.1
panax_japonicus_GWHPBEIH041576.1 panax_japonicus panax_japonicus_GWHPBEIH041576.1
panax_japonicus_GWHPBEIH052128.1 panax_japonicus panax_japonicus_GWHPBEIH052128.1
panax_japonicus_GWHPBEIH057299.1 panax_japonicus panax_japonicus_GWHPBEIH057299.1
panax_japonicus_GWHPBEIH060260.1 panax_japonicus panax_japonicus_GWHPBEIH060260.1
panax_japonicus_GWHPBEIH060541.1 panax_japonicus panax_japonicus_GWHPBEIH060541.1
panax_quinquefolius_GWHPBEIR006431.1 panax_quinquefolius panax_quinquefolius_GWHPBEIR006431.1
panax_quinquefolius_GWHPBEIR023454.1 panax_quinquefolius panax_quinquefolius_GWHPBEIR023454.1
panax_quinquefolius_GWHPBEIR032486.1 panax_quinquefolius panax_quinquefolius_GWHPBEIR032486.1
panax_quinquefolius_GWHPBEIR042299.1 panax_quinquefolius panax_quinquefolius_GWHPBEIR042299.1
panax_quinquefolius_GWHPBEIR051614.1 panax_quinquefolius panax_quinquefolius_GWHPBEIR051614.1
panax_stipuleanatus_GWHPBEIJ004636.1 panax_stipuleanatus panax_stipuleanatus_GWHPBEIJ004636.1
panax_stipuleanatus_GWHPBEIJ004912.1 panax_stipuleanatus panax_stipuleanatus_GWHPBEIJ004912.1
panax_stipuleanatus_GWHPBEIJ007320.1 panax_stipuleanatus panax_stipuleanatus_GWHPBEIJ007320.1
panax_stipuleanatus_GWHPBEIJ014465.1 panax_stipuleanatus panax_stipuleanatus_GWHPBEIJ014465.1
panax_stipuleanatus_GWHPBEIJ034069.1 panax_stipuleanatus panax_stipuleanatus_GWHPBEIJ034069.1
panax_stipuleanatus_GWHPBEIJ037418.1 panax_stipuleanatus panax_stipuleanatus_GWHPBEIJ037418.1
panax_stipuleanatus_GWHPBEIJ037481.1 panax_stipuleanatus panax_stipuleanatus_GWHPBEIJ037481.1
Phal01G0019590.1 panicum_hallii Phal01G0019590.1