PlantSME Plant secondary metabolism enzyme database

Panicum hallii (panicum_hallii)

Imported from atlas release summary for Panicum hallii.

2136
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 570 20 BAHD (217) View species results
Alkaloid pathway 494 21 7DLGT (88) View species results
Phenylpropanoid pathway 437 11 POD (218) View species results
Flavonoid pathway 289 10 UFGT (178) View species results
Rosmarinic acid pathway 195 7 C4H (101) View species results
Steroid pathway 151 11 SMT1/SMT2/SMT3 (55) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1901 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 389 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Phal01G0007480.1 Alkaloid 16OMT medium borderline
Phal02G0008770.1 Alkaloid 16OMT medium borderline
Phal02G0008890.1 Alkaloid 16OMT medium pass
Phal02G0011590.1 Alkaloid 16OMT medium borderline
Phal03G0020760.1 Alkaloid 16OMT medium borderline
Phal03G0020770.1 Alkaloid 16OMT medium borderline
Phal03G0020780.1 Alkaloid 16OMT medium borderline
Phal03G0020800.1 Alkaloid 16OMT medium borderline
Phal05G0014100.1 Alkaloid 16OMT medium borderline
Phal05G0015080.1 Alkaloid 16OMT medium borderline
Phal05G0043570.1 Alkaloid 16OMT medium borderline
Phal06G0003800.1 Alkaloid 16OMT medium borderline
Phal06G0017510.1 Alkaloid 16OMT medium borderline
Phal07G0007230.1 Alkaloid 16OMT medium borderline
Phal07G0016650.2 Alkaloid 16OMT low borderline
Phal07G0016660.1 Alkaloid 16OMT low borderline
Phal08G0008300.1 Alkaloid 16OMT medium borderline
Phal08G0009280.1 Alkaloid 16OMT medium borderline
Phal08G0009600.1 Alkaloid 16OMT medium borderline
Phal08G0012090.1 Alkaloid 16OMT medium borderline
Phal08G0012650.1 Alkaloid 16OMT medium borderline
Phal08G0012680.1 Alkaloid 16OMT medium borderline
Phal08G0013840.1 Alkaloid 16OMT medium borderline
Phal08G0015340.2 Alkaloid 16OMT low borderline
Phal08G0020110.1 Alkaloid 16OMT medium borderline
Phal08G0020140.1 Alkaloid 16OMT medium borderline
Phal09G0020060.1 Alkaloid 16OMT low borderline
Phal09G0020060.2 Alkaloid 16OMT low borderline
Phal09G0024060.1 Alkaloid 16OMT medium borderline
Phal09G0024060.2 Alkaloid 16OMT medium borderline
Phal09G0024060.3 Alkaloid 16OMT medium borderline
Phal09G0024060.4 Alkaloid 16OMT medium borderline
Phal09G0024060.5 Alkaloid 16OMT medium borderline
Phal09G0024070.1 Alkaloid 16OMT medium borderline
Phalscaffold_4380000950.1 Alkaloid 16OMT medium borderline
Phalscaffold_4380000960.1 Alkaloid 16OMT medium borderline
Phalscaffold_4380000980.1 Alkaloid 16OMT medium borderline
Phal01G0003240.1 Alkaloid 7DLGT medium pass
Phal01G0003290.1 Alkaloid 7DLGT medium pass
Phal01G0005840.1 Alkaloid 7DLGT low borderline
Phal01G0006430.1 Alkaloid 7DLGT medium pass
Phal01G0007870.1 Alkaloid 7DLGT medium pass
Phal01G0007900.1 Alkaloid 7DLGT medium pass
Phal01G0007920.1 Alkaloid 7DLGT low borderline
Phal01G0009850.1 Alkaloid 7DLGT medium pass
Phal01G0009870.1 Alkaloid 7DLGT medium pass
Phal01G0009880.1 Alkaloid 7DLGT medium pass
Phal01G0011420.1 Alkaloid 7DLGT low borderline
Phal01G0011850.1 Alkaloid 7DLGT medium pass
Phal01G0011860.1 Alkaloid 7DLGT medium pass