PlantSME Plant secondary metabolism enzyme database

Panicum hallii (panicum_hallii)

Imported from atlas release summary for Panicum hallii.

2136
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 570 20 BAHD (217) View species results
Alkaloid pathway 494 21 7DLGT (88) View species results
Phenylpropanoid pathway 437 11 POD (218) View species results
Flavonoid pathway 289 10 UFGT (178) View species results
Rosmarinic acid pathway 195 7 C4H (101) View species results
Steroid pathway 151 11 SMT1/SMT2/SMT3 (55) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1901 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 389 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
Phal01G0011470.1 Alkaloid PMT medium borderline
Phal01G0035910.1 Alkaloid PMT medium pass
Phal02G0010080.1 Alkaloid PMT medium borderline
Phal02G0015640.1 Alkaloid PMT medium pass
Phal02G0015670.1 Alkaloid PMT medium pass
Phal02G0021170.1 Alkaloid PMT medium pass
Phal02G0022440.1 Alkaloid PMT medium pass
Phal03G0004870.1 Alkaloid PMT low borderline
Phal03G0010560.1 Alkaloid PMT medium pass
Phal03G0013340.1 Alkaloid PMT medium pass
Phal03G0013640.1 Alkaloid PMT medium pass
Phal03G0033420.1 Alkaloid PMT medium pass
Phal03G0039740.1 Alkaloid PMT medium pass
Phal04G0001790.1 Alkaloid PMT medium pass
Phal04G0001800.1 Alkaloid PMT medium pass
Phal04G0009210.1 Alkaloid PMT medium pass
Phal04G0009220.1 Alkaloid PMT medium pass
Phal04G0015620.1 Alkaloid PMT medium borderline
Phal04G0023290.1 Alkaloid PMT low borderline
Phal04G0023300.1 Alkaloid PMT low borderline
Phal05G0003370.1 Alkaloid PMT medium pass
Phal05G0023710.1 Alkaloid PMT medium pass
Phal05G0023720.1 Alkaloid PMT medium pass
Phal05G0034200.1 Alkaloid PMT medium pass
Phal05G0034210.1 Alkaloid PMT medium pass
Phal05G0043440.1 Alkaloid PMT medium pass
Phal05G0043990.1 Alkaloid PMT medium pass
Phal06G0015270.1 Alkaloid PMT medium pass
Phal06G0015280.1 Alkaloid PMT medium pass
Phal06G0016350.1 Alkaloid PMT low borderline
Phal07G0000840.1 Alkaloid PMT medium pass
Phal07G0003090.1 Alkaloid PMT medium pass
Phal07G0022850.1 Alkaloid PMT low borderline
Phal09G0025610.1 Alkaloid PMT low borderline
Phal09G0036090.1 Alkaloid PMT medium pass