PlantSME Plant secondary metabolism enzyme database

Panicum hallii (panicum_hallii)

Imported from atlas release summary for Panicum hallii.

2136
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 570 20 BAHD (217) View species results
Alkaloid pathway 494 21 7DLGT (88) View species results
Phenylpropanoid pathway 437 11 POD (218) View species results
Flavonoid pathway 289 10 UFGT (178) View species results
Rosmarinic acid pathway 195 7 C4H (101) View species results
Steroid pathway 151 11 SMT1/SMT2/SMT3 (55) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1901 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 389 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
Phal01G0014800.1 Alkaloid IO medium borderline
Phal02G0018370.1 Alkaloid IO medium borderline
Phal02G0019560.1 Alkaloid IO medium borderline
Phal02G0022240.1 Alkaloid IO medium borderline
Phal02G0028140.1 Alkaloid IO medium borderline
Phal03G0031560.1 Alkaloid IO medium borderline
Phal04G0003230.1 Alkaloid IO low borderline
Phal04G0014340.1 Alkaloid IO high pass
Phal04G0015910.1 Alkaloid IO medium borderline
Phal05G0005470.2 Alkaloid IO low borderline
Phal05G0018560.1 Alkaloid IO medium borderline
Phal05G0018570.1 Alkaloid IO medium borderline
Phal05G0036250.1 Alkaloid IO medium borderline
Phal06G0017950.1 Alkaloid IO medium borderline
Phal06G0023570.1 Alkaloid IO medium borderline
Phal07G0018690.2 Alkaloid IO medium borderline
Phal09G0001930.1 Alkaloid IO medium borderline
Phal09G0017610.1 Alkaloid IO medium pass
Phal09G0054690.1 Alkaloid IO medium borderline