PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
poncirus_trifoliata_Pt5g006660.1 poncirus_trifoliata poncirus_trifoliata_Pt5g006660.1
GWHPAAEP001047 populus_alba GWHPAAEP001047
GWHPAAEP002674 populus_alba GWHPAAEP002674
GWHPAAEP010471 populus_alba GWHPAAEP010471
GWHPAAEP021316 populus_alba GWHPAAEP021316
GWHPAAEP023150 populus_alba GWHPAAEP023150
GWHPAAEP023151 populus_alba GWHPAAEP023151
populus_euphratica_GWHPAAYU016039 populus_euphratica populus_euphratica_GWHPAAYU016039
populus_euphratica_GWHPAAYU018300 populus_euphratica populus_euphratica_GWHPAAYU018300
populus_euphratica_GWHPAAYU024666 populus_euphratica populus_euphratica_GWHPAAYU024666
populus_euphratica_GWHPAAYU029392 populus_euphratica populus_euphratica_GWHPAAYU029392
PglaA02G0018520.1 populus_glandulosa_x_p_alba PglaA02G0018520.1
PglaA03G0006080.1 populus_glandulosa_x_p_alba PglaA03G0006080.1
PglaA03G0006080.2 populus_glandulosa_x_p_alba PglaA03G0006080.2
PglaA05G0007050.1 populus_glandulosa_x_p_alba PglaA05G0007050.1
PglaG02G0000800.1 populus_glandulosa_x_p_alba PglaG02G0000800.1
PglaG02G0019510.1 populus_glandulosa_x_p_alba PglaG02G0019510.1
PglaG02G0019510.2 populus_glandulosa_x_p_alba PglaG02G0019510.2
PglaG03G0006050.1 populus_glandulosa_x_p_alba PglaG03G0006050.1
PglaG05G0006900.1 populus_glandulosa_x_p_alba PglaG05G0006900.1
PglaG11G0005980.1 populus_glandulosa_x_p_alba PglaG11G0005980.1
populus_ilicifolia_GWHPABKR004470 populus_ilicifolia populus_ilicifolia_GWHPABKR004470
populus_ilicifolia_GWHPABKR007673 populus_ilicifolia populus_ilicifolia_GWHPABKR007673
populus_ilicifolia_GWHPABKR011640 populus_ilicifolia populus_ilicifolia_GWHPABKR011640
Ppruscaffold1900101210 populus_pruinosa Ppruscaffold1900101210
Ppruscaffold24570143900 populus_pruinosa Ppruscaffold24570143900
Ppruscaffold4220206530 populus_pruinosa Ppruscaffold4220206530
Ppruscaffold5610242600 populus_pruinosa Ppruscaffold5610242600
Potra000353g01340.1 populus_tremula Potra000353g01340.1
Potra000353g01340.10 populus_tremula Potra000353g01340.10