PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Potra000378g01639.1 Alkaloid 16OMT medium borderline
Potra000465g02770.1 Alkaloid 16OMT low borderline
Potra000571g04228.1 Alkaloid 16OMT medium borderline
Potra000571g04228.2 Alkaloid 16OMT medium borderline
Potra000571g04228.3 Alkaloid 16OMT medium borderline
Potra000571g04228.4 Alkaloid 16OMT medium borderline
Potra000847g06837.1 Alkaloid 16OMT medium borderline
Potra000847g06837.2 Alkaloid 16OMT medium borderline
Potra000847g06838.1 Alkaloid 16OMT medium borderline
Potra000847g06838.2 Alkaloid 16OMT medium borderline
Potra000853g06910.1 Alkaloid 16OMT medium borderline
Potra000853g06910.2 Alkaloid 16OMT medium borderline
Potra001053g09010.1 Alkaloid 16OMT medium borderline
Potra001053g09010.2 Alkaloid 16OMT medium borderline
Potra001064g09133.1 Alkaloid 16OMT medium borderline
Potra001064g09133.2 Alkaloid 16OMT medium borderline
Potra001064g09133.3 Alkaloid 16OMT medium borderline
Potra001077g09308.1 Alkaloid 16OMT medium borderline
Potra001077g09309.1 Alkaloid 16OMT medium borderline
Potra001077g09309.2 Alkaloid 16OMT medium borderline
Potra001077g09309.3 Alkaloid 16OMT medium borderline
Potra001111g09756.1 Alkaloid 16OMT medium borderline
Potra001111g09757.1 Alkaloid 16OMT medium borderline
Potra001205g10416.1 Alkaloid 16OMT medium borderline
Potra001210g30658.1 Alkaloid 16OMT medium borderline
Potra001774g31253.1 Alkaloid 16OMT low borderline
Potra002006g15740.1 Alkaloid 16OMT medium borderline
Potra003101g20743.1 Alkaloid 16OMT low borderline
Potra003101g20743.10 Alkaloid 16OMT low borderline
Potra003101g20743.2 Alkaloid 16OMT low borderline
Potra003101g20743.3 Alkaloid 16OMT low borderline
Potra003101g20743.4 Alkaloid 16OMT low borderline
Potra003101g20743.5 Alkaloid 16OMT low borderline
Potra003101g20743.6 Alkaloid 16OMT low borderline
Potra003101g20743.7 Alkaloid 16OMT low borderline
Potra003101g20743.8 Alkaloid 16OMT low borderline
Potra003101g20743.9 Alkaloid 16OMT low borderline
Potra003960g23770.1 Alkaloid 16OMT medium borderline
Potra004103g24504.1 Alkaloid 16OMT medium borderline
Potra004103g24504.2 Alkaloid 16OMT medium borderline
Potra004103g24505.1 Alkaloid 16OMT medium borderline
Potra004156g24635.1 Alkaloid 16OMT medium borderline
Potra005153g25297.1 Alkaloid 16OMT medium borderline
Potra005153g25297.2 Alkaloid 16OMT medium borderline
Potra005487g25411.1 Alkaloid 16OMT medium borderline
Potra005487g25411.2 Alkaloid 16OMT medium borderline
Potra007180g25909.1 Alkaloid 16OMT medium borderline
Potra007189g25910.1 Alkaloid 16OMT medium borderline
Potra008035g26084.1 Alkaloid 16OMT medium borderline
Potra008035g26084.2 Alkaloid 16OMT medium borderline