PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status Best Target
Potra000611g04646.1 Flavonoid PAL medium pass PAL__00002__sp_P35510_PAL1_ARATH
Potra007760g26019.1 Flavonoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
Potra008798g26230.1 Flavonoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
Potra008798g26230.2 Flavonoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
Potra010140g26499.1 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Potra010140g26499.2 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Potra174349g27713.1 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Potra189403g28680.1 Flavonoid PAL medium pass PAL__00002__sp_P35510_PAL1_ARATH
Potra000611g04646.1 Phenylpropanoid PAL medium pass PAL__00002__sp_P35510_PAL1_ARATH
Potra007760g26019.1 Phenylpropanoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
Potra008798g26230.1 Phenylpropanoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
Potra008798g26230.2 Phenylpropanoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
Potra010140g26499.1 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Potra010140g26499.2 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Potra174349g27713.1 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Potra189403g28680.1 Phenylpropanoid PAL medium pass PAL__00002__sp_P35510_PAL1_ARATH
Potra000611g04646.1 Rosmarinic Acid PAL medium pass PAL__00002__sp_P35510_PAL1_ARATH
Potra007760g26019.1 Rosmarinic Acid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
Potra008798g26230.1 Rosmarinic Acid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
Potra008798g26230.2 Rosmarinic Acid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
Potra010140g26499.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Potra010140g26499.2 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Potra174349g27713.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Potra189403g28680.1 Rosmarinic Acid PAL medium pass PAL__00002__sp_P35510_PAL1_ARATH