PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
Reset
Gene Pathway Family Confidence Status
Potra000093g00315.1 Alkaloid T3O medium pass
Potra000148g00519.1 Alkaloid T3O medium borderline
Potra000175g00665.1 Alkaloid T3O low borderline
Potra000180g00706.1 Alkaloid T3O medium pass
Potra000180g00706.2 Alkaloid T3O medium pass
Potra000341g01173.1 Alkaloid T3O medium pass
Potra000341g01173.2 Alkaloid T3O medium pass
Potra000341g01173.3 Alkaloid T3O medium pass
Potra000458g02654.1 Alkaloid T3O low borderline
Potra000490g03098.4 Alkaloid T3O medium borderline
Potra000490g03098.5 Alkaloid T3O high pass
Potra000490g03098.6 Alkaloid T3O high pass
Potra000542g03822.1 Alkaloid T3O low borderline
Potra000542g03822.2 Alkaloid T3O low borderline
Potra000542g03822.5 Alkaloid T3O low borderline
Potra000578g04319.1 Alkaloid T3O low borderline
Potra000601g04563.1 Alkaloid T3O medium pass
Potra000601g04563.2 Alkaloid T3O medium pass
Potra000663g05121.1 Alkaloid T3O low borderline
Potra000683g05292.1 Alkaloid T3O medium pass
Potra000685g05310.1 Alkaloid T3O medium borderline
Potra000701g05464.1 Alkaloid T3O medium pass
Potra000701g05464.2 Alkaloid T3O low borderline
Potra000701g05464.3 Alkaloid T3O medium pass
Potra000701g05464.4 Alkaloid T3O low borderline
Potra000701g05464.5 Alkaloid T3O medium pass
Potra000701g05465.1 Alkaloid T3O medium pass
Potra000701g05466.1 Alkaloid T3O medium borderline
Potra000729g05721.1 Alkaloid T3O medium borderline
Potra000729g05722.1 Alkaloid T3O medium borderline
Potra000729g05723.1 Alkaloid T3O medium borderline
Potra000729g05723.2 Alkaloid T3O medium borderline
Potra000820g06544.1 Alkaloid T3O medium borderline
Potra000820g06544.2 Alkaloid T3O medium borderline
Potra000820g06544.3 Alkaloid T3O medium borderline
Potra000828g06627.1 Alkaloid T3O medium pass
Potra000854g06913.1 Alkaloid T3O medium borderline
Potra000863g06975.1 Alkaloid T3O medium borderline
Potra000863g06975.2 Alkaloid T3O medium borderline
Potra000868g06995.1 Alkaloid T3O medium pass
Potra000868g06995.2 Alkaloid T3O medium pass
Potra000912g07386.1 Alkaloid T3O medium borderline
Potra000971g08018.1 Alkaloid T3O medium borderline
Potra000973g08038.1 Alkaloid T3O medium pass
Potra000991g08208.1 Alkaloid T3O low borderline
Potra001008g08390.1 Alkaloid T3O medium pass
Potra001008g08390.2 Alkaloid T3O medium pass
Potra001008g08390.3 Alkaloid T3O medium pass
Potra001027g08594.1 Alkaloid T3O medium borderline
Potra001048g08911.1 Alkaloid T3O medium borderline