PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status Best Target
Potra000292g01065.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra000292g01065.2 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra000520g03509.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Potra000590g04457.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra000606g04611.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra001020g08518.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Potra001118g09878.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra001118g09878.2 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra001118g09878.3 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra001118g09878.4 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra001118g09878.5 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra001361g11646.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra001381g11787.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra001528g12701.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra001567g12959.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra001567g12959.2 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra001786g14517.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Potra001960g15484.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Potra001960g15484.2 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Potra002063g16086.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Potra002168g16738.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Potra002168g16738.2 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Potra002176g16785.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra002176g16785.2 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra002176g16785.5 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra002248g17272.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra002248g17272.2 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra002435g18478.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra002435g18478.2 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra002472g18709.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra002494g18846.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra002494g18846.2 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra002494g18846.3 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra002502g18892.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra002502g18892.2 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra002775g19954.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra002775g19954.2 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra002877g20209.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra003186g20932.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra003313g21312.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra003313g21312.2 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra003431g21645.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra003431g21645.3 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra003784g22850.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra003890g23365.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra003890g23365.2 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra004493g24986.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Potra004585g25093.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra004585g25093.2 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Potra004585g25093.3 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL