PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
Potra000131g00437.1 Alkaloid H6H low borderline
Potra000131g00437.2 Alkaloid H6H low borderline
Potra000131g00437.3 Alkaloid H6H low borderline
Potra000181g00724.1 Alkaloid H6H medium borderline
Potra000181g00724.2 Alkaloid H6H medium borderline
Potra000344g01208.1 Alkaloid H6H low borderline
Potra000449g02531.1 Alkaloid H6H medium borderline
Potra000493g03142.1 Alkaloid H6H low borderline
Potra000493g03142.2 Alkaloid H6H low borderline
Potra000493g03142.3 Alkaloid H6H low borderline
Potra000571g04229.1 Alkaloid H6H medium borderline
Potra000571g04229.2 Alkaloid H6H medium borderline
Potra000571g04229.3 Alkaloid H6H medium borderline
Potra000571g04229.4 Alkaloid H6H medium borderline
Potra000583g04349.1 Alkaloid H6H medium pass
Potra000583g04349.2 Alkaloid H6H low borderline
Potra000618g04699.1 Alkaloid H6H low borderline
Potra000674g05224.1 Alkaloid H6H medium borderline
Potra000674g05224.3 Alkaloid H6H medium pass
Potra000678g05256.1 Alkaloid H6H low borderline
Potra000707g05522.1 Alkaloid H6H low borderline
Potra000707g05522.2 Alkaloid H6H low borderline
Potra000818g06512.1 Alkaloid H6H medium pass
Potra000818g06512.2 Alkaloid H6H medium pass
Potra000818g06517.1 Alkaloid H6H medium borderline
Potra000904g07339.1 Alkaloid H6H low borderline
Potra000928g07560.1 Alkaloid H6H medium borderline
Potra000928g07560.2 Alkaloid H6H medium borderline
Potra000959g07878.1 Alkaloid H6H medium pass
Potra001094g09530.1 Alkaloid H6H medium pass
Potra001094g09530.2 Alkaloid H6H medium pass
Potra001094g09530.3 Alkaloid H6H medium pass
Potra001105g09661.1 Alkaloid H6H low borderline
Potra001166g10111.1 Alkaloid H6H medium borderline
Potra001166g10111.3 Alkaloid H6H medium borderline
Potra001195g10332.3 Alkaloid H6H low borderline
Potra001205g10410.1 Alkaloid H6H medium pass
Potra001205g10420.1 Alkaloid H6H medium borderline
Potra001209g10468.1 Alkaloid H6H medium borderline
Potra001255g10804.1 Alkaloid H6H low borderline
Potra001255g10804.3 Alkaloid H6H low borderline
Potra001355g11612.1 Alkaloid H6H medium borderline
Potra001355g11612.2 Alkaloid H6H medium borderline
Potra001412g11979.1 Alkaloid H6H low borderline
Potra001453g12223.1 Alkaloid H6H medium borderline
Potra001453g12230.1 Alkaloid H6H high pass
Potra001453g12230.2 Alkaloid H6H high pass
Potra001453g12230.3 Alkaloid H6H high pass
Potra001453g12230.4 Alkaloid H6H high pass
Potra001483g12391.1 Alkaloid H6H low borderline