PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BBE
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Gene Pathway Family Confidence Status
Potra000648g04960.1 Alkaloid BBE medium borderline
Potra000656g33135.1 Alkaloid BBE low borderline
Potra000704g05503.1 Alkaloid BBE medium borderline
Potra000715g05604.1 Alkaloid BBE medium borderline
Potra000715g05605.1 Alkaloid BBE medium borderline
Potra000790g06251.1 Alkaloid BBE medium borderline
Potra000790g06252.1 Alkaloid BBE medium borderline
Potra000790g06253.1 Alkaloid BBE medium borderline
Potra000790g06260.1 Alkaloid BBE medium borderline
Potra000967g07950.1 Alkaloid BBE medium borderline
Potra000978g08091.1 Alkaloid BBE medium borderline
Potra001890g15038.1 Alkaloid BBE medium borderline
Potra001890g15039.1 Alkaloid BBE medium borderline
Potra001890g15041.1 Alkaloid BBE medium borderline
Potra001890g15042.1 Alkaloid BBE medium borderline
Potra001890g15044.1 Alkaloid BBE medium borderline
Potra001890g15046.1 Alkaloid BBE medium borderline
Potra002160g16681.1 Alkaloid BBE medium borderline
Potra002160g16682.1 Alkaloid BBE medium borderline
Potra002160g33676.1 Alkaloid BBE medium borderline
Potra002160g33676.2 Alkaloid BBE medium borderline
Potra002160g34971.1 Alkaloid BBE medium borderline
Potra002191g16878.1 Alkaloid BBE medium borderline
Potra002943g20361.1 Alkaloid BBE medium borderline
Potra002943g20362.1 Alkaloid BBE medium borderline
Potra003184g20925.1 Alkaloid BBE medium borderline
Potra003184g20925.2 Alkaloid BBE medium borderline
Potra003184g20925.3 Alkaloid BBE medium borderline
Potra003184g32112.1 Alkaloid BBE medium borderline
Potra003258g21145.1 Alkaloid BBE medium borderline
Potra003367g21464.1 Alkaloid BBE medium borderline
Potra003486g21810.1 Alkaloid BBE medium borderline
Potra003648g22281.1 Alkaloid BBE medium borderline
Potra004158g24638.1 Alkaloid BBE medium borderline
Potra004216g24696.1 Alkaloid BBE medium borderline
Potra004238g24716.1 Alkaloid BBE medium borderline
Potra004238g24717.1 Alkaloid BBE medium borderline
Potra004238g24717.2 Alkaloid BBE medium borderline
Potra004259g24748.1 Alkaloid BBE medium borderline
Potra004457g24941.1 Alkaloid BBE medium borderline
Potra004861g32746.1 Alkaloid BBE medium borderline
Potra006357g25663.1 Alkaloid BBE medium borderline
Potra007210g25915.1 Alkaloid BBE medium borderline
Potra010112g26489.1 Alkaloid BBE medium borderline
Potra098389g33950.1 Alkaloid BBE low borderline
Potra166156g31081.1 Alkaloid BBE medium borderline
Potra177133g27936.1 Alkaloid BBE medium borderline
Potra194899g28995.1 Alkaloid BBE medium borderline
Potra194901g28996.1 Alkaloid BBE medium borderline
Potra196553g29119.1 Alkaloid BBE medium borderline