PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
Potra000028g00138.1 Alkaloid G8O/G8H medium borderline
Potra000467g02785.1 Alkaloid G8O/G8H medium borderline
Potra000467g02785.2 Alkaloid G8O/G8H low borderline
Potra000751g05908.1 Alkaloid G8O/G8H medium borderline
Potra000849g34183.1 Alkaloid G8O/G8H medium borderline
Potra000874g07032.1 Alkaloid G8O/G8H medium borderline
Potra001089g30528.1 Alkaloid G8O/G8H medium borderline
Potra001247g10732.1 Alkaloid G8O/G8H medium borderline
Potra001285g11089.1 Alkaloid G8O/G8H medium borderline
Potra001794g14552.1 Alkaloid G8O/G8H medium borderline
Potra001795g14557.1 Alkaloid G8O/G8H medium borderline
Potra001876g14979.1 Alkaloid G8O/G8H medium borderline
Potra001876g14979.2 Alkaloid G8O/G8H medium borderline
Potra001907g15128.3 Alkaloid G8O/G8H medium borderline
Potra001907g15128.4 Alkaloid G8O/G8H medium borderline
Potra001907g15128.5 Alkaloid G8O/G8H medium borderline
Potra001965g15512.1 Alkaloid G8O/G8H medium borderline
Potra001965g15512.2 Alkaloid G8O/G8H medium borderline
Potra002139g16564.1 Alkaloid G8O/G8H medium borderline
Potra002311g17626.2 Alkaloid G8O/G8H medium borderline
Potra002448g18542.1 Alkaloid G8O/G8H medium borderline
Potra002448g18543.1 Alkaloid G8O/G8H medium pass
Potra002696g19782.1 Alkaloid G8O/G8H medium borderline
Potra003450g21702.2 Alkaloid G8O/G8H medium borderline
Potra005080g25268.1 Alkaloid G8O/G8H medium borderline
Potra005271g25339.1 Alkaloid G8O/G8H medium borderline
Potra005304g32952.1 Alkaloid G8O/G8H medium borderline
Potra007587g25997.1 Alkaloid G8O/G8H medium borderline
Potra007987g26074.1 Alkaloid G8O/G8H medium borderline
Potra007987g26074.2 Alkaloid G8O/G8H medium borderline
Potra009140g26296.1 Alkaloid G8O/G8H medium borderline
Potra160297g26851.1 Alkaloid G8O/G8H medium borderline
Potra182600g28240.2 Alkaloid G8O/G8H medium borderline
Potra187217g28489.1 Alkaloid G8O/G8H medium borderline
Potra197541g34420.1 Alkaloid G8O/G8H medium borderline
Potra198001g30321.1 Alkaloid G8O/G8H medium borderline