PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
Potra000158g00569.1 Alkaloid T16H medium borderline
Potra000370g01540.1 Alkaloid T16H medium borderline
Potra000490g03098.1 Alkaloid T16H medium borderline
Potra000490g03098.2 Alkaloid T16H medium borderline
Potra000490g03098.3 Alkaloid T16H medium borderline
Potra000586g04393.1 Alkaloid T16H medium borderline
Potra000754g05943.1 Alkaloid T16H medium borderline
Potra000754g05943.2 Alkaloid T16H medium borderline
Potra000841g06786.1 Alkaloid T16H medium borderline
Potra001148g10006.1 Alkaloid T16H medium borderline
Potra001585g13100.1 Alkaloid T16H medium borderline
Potra001585g13100.2 Alkaloid T16H medium borderline
Potra001614g37015.1 Alkaloid T16H low borderline
Potra001645g13492.1 Alkaloid T16H medium borderline
Potra001645g13492.2 Alkaloid T16H medium borderline
Potra001645g13492.3 Alkaloid T16H low borderline
Potra001645g13492.4 Alkaloid T16H low borderline
Potra001795g14555.1 Alkaloid T16H low borderline
Potra001804g14599.1 Alkaloid T16H medium borderline
Potra001907g15128.1 Alkaloid T16H medium borderline
Potra001907g15128.2 Alkaloid T16H medium borderline
Potra002696g19781.1 Alkaloid T16H medium borderline
Potra002923g20324.4 Alkaloid T16H low borderline
Potra002923g20324.5 Alkaloid T16H low borderline
Potra002923g20324.6 Alkaloid T16H low borderline
Potra002923g20324.7 Alkaloid T16H low borderline
Potra002923g20324.8 Alkaloid T16H low borderline
Potra003058g20641.1 Alkaloid T16H medium borderline
Potra003101g20744.1 Alkaloid T16H medium borderline
Potra003101g20744.2 Alkaloid T16H medium borderline
Potra003101g20744.3 Alkaloid T16H medium borderline
Potra003101g20744.4 Alkaloid T16H low borderline
Potra003205g20996.1 Alkaloid T16H medium pass
Potra003900g23414.3 Alkaloid T16H low borderline
Potra004998g25245.1 Alkaloid T16H low borderline
Potra004998g25245.2 Alkaloid T16H low borderline
Potra006169g25588.1 Alkaloid T16H low borderline
Potra006311g25650.2 Alkaloid T16H low borderline
Potra182600g28240.1 Alkaloid T16H medium borderline