PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
Potra000314g01116.1 Alkaloid PYKS low borderline
Potra000354g01371.1 Alkaloid PYKS low borderline
Potra000395g01821.1 Alkaloid PYKS high pass
Potra000539g03787.1 Alkaloid PYKS high pass
Potra000703g05496.1 Alkaloid PYKS high pass
Potra000703g05496.2 Alkaloid PYKS high pass
Potra000783g06186.1 Alkaloid PYKS low borderline
Potra000783g06186.2 Alkaloid PYKS low borderline
Potra000822g06557.1 Alkaloid PYKS low borderline
Potra000946g07750.1 Alkaloid PYKS low borderline
Potra001257g10840.1 Alkaloid PYKS high pass
Potra001257g10840.2 Alkaloid PYKS high pass
Potra001536g12757.1 Alkaloid PYKS low borderline
Potra001536g12757.2 Alkaloid PYKS low borderline
Potra001566g12943.1 Alkaloid PYKS low borderline
Potra001583g13082.1 Alkaloid PYKS medium pass
Potra001583g34820.1 Alkaloid PYKS medium pass
Potra002016g15816.1 Alkaloid PYKS low borderline
Potra002016g15816.2 Alkaloid PYKS low borderline
Potra002016g15816.3 Alkaloid PYKS low borderline
Potra002028g15880.1 Alkaloid PYKS low borderline
Potra002028g15880.2 Alkaloid PYKS low borderline
Potra002133g16526.1 Alkaloid PYKS high pass
Potra002236g17180.1 Alkaloid PYKS high pass
Potra002245g17252.1 Alkaloid PYKS high pass
Potra002538g19119.1 Alkaloid PYKS low borderline
Potra002995g20496.1 Alkaloid PYKS low borderline
Potra003325g21358.1 Alkaloid PYKS low borderline
Potra003325g21358.2 Alkaloid PYKS low borderline
Potra003755g22708.1 Alkaloid PYKS low borderline
Potra003755g22708.2 Alkaloid PYKS low borderline
Potra004417g24902.1 Alkaloid PYKS low borderline
Potra004541g25046.1 Alkaloid PYKS low borderline
Potra004541g25046.2 Alkaloid PYKS low borderline
Potra009305g26333.1 Alkaloid PYKS low borderline
Potra009305g26333.2 Alkaloid PYKS low borderline
Potra010177g26513.1 Alkaloid PYKS high pass
Potra010258g26537.1 Alkaloid PYKS low borderline
Potra151488g26687.1 Alkaloid PYKS low borderline
Potra160458g26858.1 Alkaloid PYKS low borderline
Potra161624g34003.1 Alkaloid PYKS medium pass
Potra163255g27081.1 Alkaloid PYKS low borderline
Potra167568g27289.1 Alkaloid PYKS low borderline
Potra169971g27483.1 Alkaloid PYKS low borderline
Potra179565g34898.1 Alkaloid PYKS medium pass
Potra179767g28047.1 Alkaloid PYKS low borderline
Potra179767g28047.2 Alkaloid PYKS low borderline
Potra180567g28111.1 Alkaloid PYKS medium pass
Potra180567g28112.1 Alkaloid PYKS high pass