PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FNS
Reset
Gene Pathway Family Confidence Status
Potra000028g00138.1 Flavonoid FNS medium borderline
Potra000050g00212.1 Flavonoid FNS low borderline
Potra000050g00212.2 Flavonoid FNS low borderline
Potra000050g00212.3 Flavonoid FNS low borderline
Potra000050g00212.4 Flavonoid FNS low borderline
Potra000050g00212.5 Flavonoid FNS low borderline
Potra000050g00212.6 Flavonoid FNS low borderline
Potra000100g00332.1 Flavonoid FNS low borderline
Potra000100g00332.2 Flavonoid FNS low borderline
Potra000157g00564.1 Flavonoid FNS low borderline
Potra000357g01397.1 Flavonoid FNS medium borderline
Potra000357g01397.2 Flavonoid FNS medium borderline
Potra000467g02785.1 Flavonoid FNS medium borderline
Potra000467g02785.2 Flavonoid FNS medium borderline
Potra000586g04393.1 Flavonoid FNS medium borderline
Potra000912g07386.1 Flavonoid FNS medium borderline
Potra001165g10110.2 Flavonoid FNS medium borderline
Potra001285g11088.1 Flavonoid FNS medium borderline
Potra001285g35467.1 Flavonoid FNS medium borderline
Potra001468g30842.1 Flavonoid FNS low borderline
Potra001570g12998.1 Flavonoid FNS medium borderline
Potra001570g12998.2 Flavonoid FNS medium borderline
Potra001614g37015.1 Flavonoid FNS low borderline
Potra001794g14552.1 Flavonoid FNS medium borderline
Potra001795g14555.1 Flavonoid FNS low borderline
Potra001907g15128.3 Flavonoid FNS medium borderline
Potra001907g15128.4 Flavonoid FNS medium borderline
Potra001907g15128.5 Flavonoid FNS medium borderline
Potra001965g15512.1 Flavonoid FNS medium borderline
Potra001965g15512.2 Flavonoid FNS medium borderline
Potra002139g16564.1 Flavonoid FNS medium borderline
Potra002311g17626.2 Flavonoid FNS medium borderline
Potra002461g18651.1 Flavonoid FNS low borderline
Potra002598g19517.1 Flavonoid FNS medium borderline
Potra002696g19782.1 Flavonoid FNS medium borderline
Potra002913g20293.1 Flavonoid FNS medium borderline
Potra003450g21702.2 Flavonoid FNS medium borderline
Potra004252g24735.1 Flavonoid FNS medium borderline
Potra005271g25339.1 Flavonoid FNS medium borderline
Potra005648g25457.1 Flavonoid FNS low borderline
Potra005743g25478.1 Flavonoid FNS low borderline
Potra006311g25650.2 Flavonoid FNS medium borderline
Potra007663g26008.1 Flavonoid FNS low borderline
Potra183476g28307.1 Flavonoid FNS low borderline
Potra187217g28489.1 Flavonoid FNS medium borderline
Potra197541g34420.1 Flavonoid FNS medium borderline
Potra200545g29519.3 Flavonoid FNS medium borderline