PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
Potra000002g00008.1 Alkaloid IO low borderline
Potra000129g00422.1 Alkaloid IO medium borderline
Potra000194g00837.1 Alkaloid IO low borderline
Potra000370g01539.1 Alkaloid IO medium borderline
Potra000508g03324.1 Alkaloid IO medium borderline
Potra000542g03822.3 Alkaloid IO low borderline
Potra000542g03822.4 Alkaloid IO low borderline
Potra000655g05045.1 Alkaloid IO medium borderline
Potra000662g34588.1 Alkaloid IO medium borderline
Potra000701g05465.2 Alkaloid IO low borderline
Potra000701g05467.1 Alkaloid IO medium borderline
Potra000701g05467.2 Alkaloid IO medium borderline
Potra000716g05618.1 Alkaloid IO medium borderline
Potra000730g05751.1 Alkaloid IO low borderline
Potra000828g06627.2 Alkaloid IO low borderline
Potra000875g07041.1 Alkaloid IO medium borderline
Potra000876g07056.1 Alkaloid IO low borderline
Potra001051g08962.1 Alkaloid IO low borderline
Potra001055g09032.1 Alkaloid IO medium borderline
Potra001056g09046.1 Alkaloid IO medium borderline
Potra001079g09332.1 Alkaloid IO medium borderline
Potra001094g09520.2 Alkaloid IO low borderline
Potra001165g10110.1 Alkaloid IO medium borderline
Potra001165g10110.2 Alkaloid IO medium borderline
Potra001174g10171.1 Alkaloid IO medium borderline
Potra001174g10171.2 Alkaloid IO medium borderline
Potra001174g10171.3 Alkaloid IO medium borderline
Potra001174g10171.4 Alkaloid IO medium borderline
Potra001174g10171.5 Alkaloid IO medium borderline
Potra001174g10171.6 Alkaloid IO medium borderline
Potra001174g10171.7 Alkaloid IO medium borderline
Potra001228g10561.1 Alkaloid IO low borderline
Potra001275g11029.1 Alkaloid IO medium borderline
Potra001285g11088.1 Alkaloid IO medium borderline
Potra001570g12998.1 Alkaloid IO medium borderline
Potra001570g12998.2 Alkaloid IO medium borderline
Potra001615g13302.1 Alkaloid IO medium borderline
Potra002089g16275.1 Alkaloid IO medium borderline
Potra002169g16741.1 Alkaloid IO medium borderline
Potra002169g16741.2 Alkaloid IO medium borderline
Potra002169g16741.3 Alkaloid IO medium borderline
Potra002169g16741.4 Alkaloid IO medium borderline
Potra002169g16741.7 Alkaloid IO medium borderline
Potra002411g18340.1 Alkaloid IO low borderline
Potra002411g18340.2 Alkaloid IO low borderline
Potra002480g18757.1 Alkaloid IO medium borderline
Potra002497g18861.1 Alkaloid IO medium borderline
Potra002497g18861.2 Alkaloid IO medium borderline
Potra002497g18861.4 Alkaloid IO medium borderline
Potra002632g19618.1 Alkaloid IO medium borderline