PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
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Gene Pathway Family Confidence Status
Potra000138g00478.1 Alkaloid SLS medium borderline
Potra000352g01310.1 Alkaloid SLS medium borderline
Potra000432g02300.1 Alkaloid SLS medium borderline
Potra000432g02301.1 Alkaloid SLS medium borderline
Potra000432g02302.1 Alkaloid SLS medium borderline
Potra000508g03331.1 Alkaloid SLS medium borderline
Potra000508g03331.2 Alkaloid SLS medium pass
Potra000633g04834.1 Alkaloid SLS medium borderline
Potra000633g04834.2 Alkaloid SLS medium borderline
Potra000686g05324.1 Alkaloid SLS medium borderline
Potra000726g05681.1 Alkaloid SLS medium borderline
Potra000726g35476.1 Alkaloid SLS medium borderline
Potra000808g06440.1 Alkaloid SLS low borderline
Potra001037g08746.1 Alkaloid SLS medium borderline
Potra001581g13071.1 Alkaloid SLS medium borderline
Potra002537g19112.1 Alkaloid SLS medium borderline
Potra002913g20293.1 Alkaloid SLS medium borderline
Potra003231g21077.1 Alkaloid SLS medium borderline
Potra003652g22310.1 Alkaloid SLS medium borderline
Potra003652g22310.2 Alkaloid SLS medium borderline
Potra004022g24309.1 Alkaloid SLS medium borderline
Potra004022g24309.2 Alkaloid SLS medium borderline
Potra004022g24309.3 Alkaloid SLS medium borderline
Potra010197g26516.1 Alkaloid SLS low borderline
Potra176450g27885.1 Alkaloid SLS medium borderline
Potra183579g31335.1 Alkaloid SLS medium borderline
Potra199028g29370.1 Alkaloid SLS medium borderline
Potra199028g29370.2 Alkaloid SLS medium borderline