PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLH
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Gene Pathway Family Confidence Status
Potra000344g01217.1 Alkaloid 7DLH medium borderline
Potra000344g01217.2 Alkaloid 7DLH medium borderline
Potra000376g01614.1 Alkaloid 7DLH medium borderline
Potra000432g02300.2 Alkaloid 7DLH medium borderline
Potra000432g02301.2 Alkaloid 7DLH medium borderline
Potra000432g32620.1 Alkaloid 7DLH low borderline
Potra000633g04834.3 Alkaloid 7DLH medium borderline
Potra000803g06374.1 Alkaloid 7DLH medium borderline
Potra000876g07055.2 Alkaloid 7DLH low borderline
Potra000973g08035.1 Alkaloid 7DLH medium borderline
Potra000973g08035.2 Alkaloid 7DLH medium borderline
Potra000973g08038.2 Alkaloid 7DLH low borderline
Potra001037g08746.2 Alkaloid 7DLH medium borderline
Potra001118g09883.1 Alkaloid 7DLH medium borderline
Potra001455g12249.1 Alkaloid 7DLH medium borderline
Potra001513g12618.1 Alkaloid 7DLH low borderline
Potra001513g12618.2 Alkaloid 7DLH low borderline
Potra002129g16502.2 Alkaloid 7DLH low borderline
Potra002148g16621.1 Alkaloid 7DLH low borderline
Potra002913g20293.2 Alkaloid 7DLH medium borderline
Potra002934g20340.1 Alkaloid 7DLH medium borderline
Potra003231g21077.2 Alkaloid 7DLH medium borderline
Potra003231g21077.3 Alkaloid 7DLH medium borderline
Potra003422g32178.1 Alkaloid 7DLH low borderline
Potra003900g23414.1 Alkaloid 7DLH medium borderline
Potra004022g24309.4 Alkaloid 7DLH medium borderline
Potra004056g24397.1 Alkaloid 7DLH medium borderline
Potra004056g24397.2 Alkaloid 7DLH medium borderline
Potra004056g24397.5 Alkaloid 7DLH medium borderline
Potra005938g33038.1 Alkaloid 7DLH medium borderline
Potra009323g26336.4 Alkaloid 7DLH low borderline
Potra163779g27121.1 Alkaloid 7DLH medium borderline
Potra176021g27858.1 Alkaloid 7DLH medium borderline
Potra177342g27948.1 Alkaloid 7DLH medium borderline
Potra200061g30319.1 Alkaloid 7DLH medium borderline