PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Potra000370g01539.1 Steroid BR6OX1/CYP85A1 low borderline
Potra000701g05464.2 Steroid BR6OX1/CYP85A1 medium borderline
Potra000701g05464.4 Steroid BR6OX1/CYP85A1 medium borderline
Potra000701g05465.3 Steroid BR6OX1/CYP85A1 medium borderline
Potra000876g07056.1 Steroid BR6OX1/CYP85A1 medium borderline
Potra001089g30528.1 Steroid BR6OX1/CYP85A1 low borderline
Potra001171g10137.1 Steroid BR6OX1/CYP85A1 low borderline
Potra001171g10137.2 Steroid BR6OX1/CYP85A1 low borderline
Potra001171g10137.3 Steroid BR6OX1/CYP85A1 low borderline
Potra001196g10348.1 Steroid BR6OX1/CYP85A1 medium borderline
Potra001196g10348.2 Steroid BR6OX1/CYP85A1 medium borderline
Potra001581g13071.1 Steroid BR6OX1/CYP85A1 medium borderline
Potra002011g15767.1 Steroid BR6OX1/CYP85A1 medium borderline
Potra002011g15767.2 Steroid BR6OX1/CYP85A1 medium borderline
Potra002011g15767.3 Steroid BR6OX1/CYP85A1 medium borderline
Potra002011g15767.4 Steroid BR6OX1/CYP85A1 medium borderline
Potra002011g15767.6 Steroid BR6OX1/CYP85A1 medium borderline
Potra002169g16741.1 Steroid BR6OX1/CYP85A1 medium borderline
Potra002169g16741.2 Steroid BR6OX1/CYP85A1 medium borderline
Potra002169g16741.3 Steroid BR6OX1/CYP85A1 medium borderline
Potra002169g16741.4 Steroid BR6OX1/CYP85A1 medium borderline
Potra002169g16741.7 Steroid BR6OX1/CYP85A1 medium borderline
Potra002497g18861.1 Steroid BR6OX1/CYP85A1 medium borderline
Potra002497g18861.2 Steroid BR6OX1/CYP85A1 medium borderline
Potra002497g18861.4 Steroid BR6OX1/CYP85A1 medium borderline
Potra002923g20324.1 Steroid BR6OX1/CYP85A1 medium borderline
Potra002923g20324.2 Steroid BR6OX1/CYP85A1 medium borderline
Potra002923g20324.3 Steroid BR6OX1/CYP85A1 medium borderline
Potra002923g20324.4 Steroid BR6OX1/CYP85A1 medium borderline
Potra002923g20324.5 Steroid BR6OX1/CYP85A1 medium borderline
Potra002923g20324.6 Steroid BR6OX1/CYP85A1 medium borderline
Potra002923g20324.7 Steroid BR6OX1/CYP85A1 medium borderline
Potra002923g20324.8 Steroid BR6OX1/CYP85A1 medium borderline
Potra003049g20626.1 Steroid BR6OX1/CYP85A1 low borderline
Potra003101g20744.1 Steroid BR6OX1/CYP85A1 medium borderline
Potra003101g20744.2 Steroid BR6OX1/CYP85A1 medium borderline
Potra003101g20744.4 Steroid BR6OX1/CYP85A1 medium borderline
Potra003101g20744.5 Steroid BR6OX1/CYP85A1 medium borderline
Potra003101g20744.6 Steroid BR6OX1/CYP85A1 medium borderline
Potra003518g21879.1 Steroid BR6OX1/CYP85A1 medium borderline
Potra003979g23950.1 Steroid BR6OX1/CYP85A1 medium borderline
Potra003979g23950.2 Steroid BR6OX1/CYP85A1 medium borderline
Potra003979g23950.3 Steroid BR6OX1/CYP85A1 medium borderline
Potra003979g23950.4 Steroid BR6OX1/CYP85A1 medium borderline
Potra004401g24886.1 Steroid BR6OX1/CYP85A1 medium borderline
Potra004401g24886.5 Steroid BR6OX1/CYP85A1 medium borderline
Potra004401g24886.6 Steroid BR6OX1/CYP85A1 medium borderline
Potra175054g27768.1 Steroid BR6OX1/CYP85A1 medium borderline
Potra176450g27885.1 Steroid BR6OX1/CYP85A1 medium borderline
Potra184110g28340.1 Steroid BR6OX1/CYP85A1 medium borderline