PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Pcabscaffold_1680283690.1 pogostemon_cablin Pcabscaffold_1680283690.1
Pcabscaffold_17460301600.1 pogostemon_cablin Pcabscaffold_17460301600.1
Pcabscaffold_1780311520.1 pogostemon_cablin Pcabscaffold_1780311520.1
Pcabscaffold_19660365290.1 pogostemon_cablin Pcabscaffold_19660365290.1
Pcabscaffold_2230446780.1 pogostemon_cablin Pcabscaffold_2230446780.1
Pcabscaffold_2560507580.1 pogostemon_cablin Pcabscaffold_2560507580.1
Pcabscaffold_2600519020.1 pogostemon_cablin Pcabscaffold_2600519020.1
Pcabscaffold_30780595790.1 pogostemon_cablin Pcabscaffold_30780595790.1
Pcabscaffold_3130603960.1 pogostemon_cablin Pcabscaffold_3130603960.1
Pcabscaffold_3590659590.1 pogostemon_cablin Pcabscaffold_3590659590.1
Pcabscaffold_5020813450.1 pogostemon_cablin Pcabscaffold_5020813450.1
Pcabscaffold_51860824790.1 pogostemon_cablin Pcabscaffold_51860824790.1
Pcabscaffold_5400842710.1 pogostemon_cablin Pcabscaffold_5400842710.1
Pcabscaffold_5400842820.1 pogostemon_cablin Pcabscaffold_5400842820.1
Pcabscaffold_540842420.1 pogostemon_cablin Pcabscaffold_540842420.1
Pcabscaffold_540842430.1 pogostemon_cablin Pcabscaffold_540842430.1
Pcabscaffold_540842530.1 pogostemon_cablin Pcabscaffold_540842530.1
polygala_tenuifolia_Pt19G00751 polygala_tenuifolia polygala_tenuifolia_Pt19G00751
polygala_tenuifolia_Pt2G00663 polygala_tenuifolia polygala_tenuifolia_Pt2G00663
Palpscaffold_30062580 polytrichastrum_alpinum Palpscaffold_30062580
Palpscaffold_30062590 polytrichastrum_alpinum Palpscaffold_30062590
Pohi419800046790 polytrichastrum_ohioense Pohi419800046790
Pohi481800103360 polytrichastrum_ohioense Pohi481800103360
Pohi498970240380 polytrichastrum_ohioense Pohi498970240380
POcom1030007460 polytrichum_commune POcom1030007460
POcom1030007500 polytrichum_commune POcom1030007500
Pstr1757410145100 polytrichum_strictum Pstr1757410145100
Pstr1969350224390 polytrichum_strictum Pstr1969350224390
Pstr1969360224440 polytrichum_strictum Pstr1969360224440
poncirus_trifoliata_Pt3g027680.1 poncirus_trifoliata poncirus_trifoliata_Pt3g027680.1