PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Pcabscaffold_100007990.1 Alkaloid 16OMT medium borderline
Pcabscaffold_100008000.1 Alkaloid 16OMT medium borderline
Pcabscaffold_1130066130.1 Alkaloid 16OMT medium borderline
Pcabscaffold_1130066140.1 Alkaloid 16OMT medium borderline
Pcabscaffold_1130066150.1 Alkaloid 16OMT medium borderline
Pcabscaffold_11740081740.1 Alkaloid 16OMT medium borderline
Pcabscaffold_11740081750.1 Alkaloid 16OMT medium borderline
Pcabscaffold_11760082560.1 Alkaloid 16OMT medium borderline
Pcabscaffold_11760082580.1 Alkaloid 16OMT medium borderline
Pcabscaffold_11760082610.1 Alkaloid 16OMT medium borderline
Pcabscaffold_11900089750.1 Alkaloid 16OMT medium borderline
Pcabscaffold_11900089760.1 Alkaloid 16OMT medium borderline
Pcabscaffold_11950091280.1 Alkaloid 16OMT low borderline
Pcabscaffold_130135040.1 Alkaloid 16OMT medium borderline
Pcabscaffold_130135050.1 Alkaloid 16OMT medium borderline
Pcabscaffold_130135060.1 Alkaloid 16OMT medium borderline
Pcabscaffold_130135070.1 Alkaloid 16OMT medium borderline
Pcabscaffold_130135080.1 Alkaloid 16OMT medium pass
Pcabscaffold_130135110.1 Alkaloid 16OMT medium borderline
Pcabscaffold_130138090.1 Alkaloid 16OMT medium borderline
Pcabscaffold_1360160730.1 Alkaloid 16OMT medium borderline
Pcabscaffold_1360160740.1 Alkaloid 16OMT medium borderline
Pcabscaffold_1360160750.1 Alkaloid 16OMT medium borderline
Pcabscaffold_1360160760.1 Alkaloid 16OMT medium borderline
Pcabscaffold_1360160770.1 Alkaloid 16OMT medium borderline
Pcabscaffold_1360160780.1 Alkaloid 16OMT medium borderline
Pcabscaffold_1360160790.1 Alkaloid 16OMT medium borderline
Pcabscaffold_13910172700.1 Alkaloid 16OMT medium borderline
Pcabscaffold_13910172710.1 Alkaloid 16OMT medium borderline
Pcabscaffold_13910172720.1 Alkaloid 16OMT medium borderline
Pcabscaffold_15160228760.1 Alkaloid 16OMT medium borderline
Pcabscaffold_161390262670.1 Alkaloid 16OMT medium borderline
Pcabscaffold_17100292340.1 Alkaloid 16OMT low borderline
Pcabscaffold_18170325360.1 Alkaloid 16OMT medium borderline
Pcabscaffold_1980369500.1 Alkaloid 16OMT low borderline
Pcabscaffold_2000393610.1 Alkaloid 16OMT medium borderline
Pcabscaffold_2220444420.1 Alkaloid 16OMT low borderline
Pcabscaffold_23370472260.1 Alkaloid 16OMT medium borderline
Pcabscaffold_23370472270.1 Alkaloid 16OMT medium borderline
Pcabscaffold_23370472280.1 Alkaloid 16OMT medium borderline
Pcabscaffold_23370472290.1 Alkaloid 16OMT medium borderline
Pcabscaffold_23370472300.1 Alkaloid 16OMT medium borderline
Pcabscaffold_23370472310.1 Alkaloid 16OMT medium borderline
Pcabscaffold_2440491410.1 Alkaloid 16OMT medium borderline
Pcabscaffold_25140501600.1 Alkaloid 16OMT medium borderline
Pcabscaffold_266_994123-20696070530400.1 Alkaloid 16OMT low borderline
Pcabscaffold_276460551100.1 Alkaloid 16OMT medium borderline
Pcabscaffold_28390558860.1 Alkaloid 16OMT low borderline
Pcabscaffold_2852_1-996370561610.1 Alkaloid 16OMT medium borderline
Pcabscaffold_2852_1-996370561670.1 Alkaloid 16OMT medium borderline