PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAMT
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Gene Pathway Family Confidence Status
Pcabscaffold_101_1-10206740019870.1 Alkaloid LAMT medium borderline
Pcabscaffold_1190089500.1 Alkaloid LAMT medium borderline
Pcabscaffold_1190089510.1 Alkaloid LAMT medium pass
Pcabscaffold_131_1149939-19609900145730.1 Alkaloid LAMT medium borderline
Pcabscaffold_15140227930.1 Alkaloid LAMT medium borderline
Pcabscaffold_15380235520.1 Alkaloid LAMT medium borderline
Pcabscaffold_16470273580.1 Alkaloid LAMT low borderline
Pcabscaffold_17380298810.1 Alkaloid LAMT medium borderline
Pcabscaffold_18540334990.1 Alkaloid LAMT medium borderline
Pcabscaffold_1860336750.1 Alkaloid LAMT medium borderline
Pcabscaffold_1880341470.1 Alkaloid LAMT medium borderline
Pcabscaffold_19620364850.1 Alkaloid LAMT medium borderline
Pcabscaffold_19620364880.1 Alkaloid LAMT medium borderline
Pcabscaffold_20382100.1 Alkaloid LAMT low borderline
Pcabscaffold_240483730.1 Alkaloid LAMT medium pass
Pcabscaffold_240483740.1 Alkaloid LAMT medium borderline
Pcabscaffold_2410487700.1 Alkaloid LAMT low borderline
Pcabscaffold_24840496870.1 Alkaloid LAMT medium borderline
Pcabscaffold_2500499410.1 Alkaloid LAMT medium borderline
Pcabscaffold_2500499430.1 Alkaloid LAMT medium borderline
Pcabscaffold_2500499440.1 Alkaloid LAMT medium borderline
Pcabscaffold_2500499450.1 Alkaloid LAMT medium borderline
Pcabscaffold_2500499460.1 Alkaloid LAMT medium borderline
Pcabscaffold_2500499470.1 Alkaloid LAMT medium borderline
Pcabscaffold_2500499480.1 Alkaloid LAMT medium borderline
Pcabscaffold_2500499490.1 Alkaloid LAMT medium borderline
Pcabscaffold_2500499500.1 Alkaloid LAMT medium pass
Pcabscaffold_27640550990.1 Alkaloid LAMT medium borderline
Pcabscaffold_28670562520.1 Alkaloid LAMT medium borderline
Pcabscaffold_3020590300.1 Alkaloid LAMT medium borderline
Pcabscaffold_3020590320.1 Alkaloid LAMT medium borderline
Pcabscaffold_3020590330.1 Alkaloid LAMT medium borderline
Pcabscaffold_3020590340.1 Alkaloid LAMT medium borderline
Pcabscaffold_33640635470.1 Alkaloid LAMT medium borderline
Pcabscaffold_34950650260.1 Alkaloid LAMT medium borderline
Pcabscaffold_37_284008-34862800682320.1 Alkaloid LAMT medium borderline
Pcabscaffold_4210734570.1 Alkaloid LAMT medium borderline
Pcabscaffold_470774330.1 Alkaloid LAMT medium borderline
Pcabscaffold_4920795000.1 Alkaloid LAMT medium borderline
Pcabscaffold_610891890.1 Alkaloid LAMT medium borderline
Pcabscaffold_6400911530.1 Alkaloid LAMT medium borderline
Pcabscaffold_6780932130.1 Alkaloid LAMT medium pass
Pcabscaffold_7430967400.1 Alkaloid LAMT medium borderline
Pcabscaffold_8861051610.1 Alkaloid LAMT medium borderline
Pcabscaffold_8861051630.1 Alkaloid LAMT medium borderline
Pcabscaffold_8861051640.1 Alkaloid LAMT medium pass
Pcabscaffold_9071064050.1 Alkaloid LAMT medium borderline
Pcabscaffold_9071064060.1 Alkaloid LAMT medium borderline
Pcabscaffold_971096430.1 Alkaloid LAMT medium borderline
Pcabscaffold_971096480.1 Alkaloid LAMT medium borderline